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Weikai,

You might look up these references:

A. Lustig et al. "Density determination by analytical  
ultracentrifugation in a rapid dynamical gradient: application to  
lipid and detergent aggregates containing proteins." Biochim.  
Biophys. Acta 1115 (1991) 85-95.

Ariel Lustig et al. "Molecular weight determination of membrane  
proteins by sedimentation equilibrium at the sucrose or Nycodenz- 
adjusted density of the hydrated detergent micelle." Biochim.  
Biophys. Acta 1464 (2000) 199-206

Ariel Lustig, a master of the old model E and the new Beckman  
instrument, did a lot of work for Jurg Rosenbusch just on this  
subject.  One other aspect that needs to be addressed is the  
compressibility of the detergent micelles.  This can vary from  
detergent to detergent.  You can find much of what you want by  
delving into the surfactant/colloidal science literature.

Also look up the work of Marc le Maire, who has studied detergent- 
protein interactions for years.  If you can, get a copy of Michael  
Grabo's thesis (Solubilization and Reconstitution of Membrane  
Proteins, Ph. D. Thesis 1982. University of Basel, Switzerland);  
there are many useful nuggets in this work.

Michael


****************************************************************
R. Michael Garavito, Ph.D.
Professor of Biochemistry & Molecular Biology
513 Biochemistry Bldg.
Michigan State University
East Lansing, MI 48824-1319
Office:  (517) 355-9724     Lab:  (517) 353-9125
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On Jun 5, 2008, at 5:57 PM, [log in to unmask] wrote:

> Hi:
>
> Just a related question.  To measure MW of membrane proteins, the  
> density
> of detergents needs to be matched by D2O/H2O and should be within  
> 1.0 to
> 1.1.  Anyone knows some literature that gives a list of detergents  
> having
> suitable density?  Unfornatatedly, the common ones like Foscholine  
> 12(DPC)
> and C12E9 do not work with my protein.
>
> Regards,
>
> Weikai
>
>
>
>
>> Hi Mike,
>>
>> try the National Analytical Ultracentrifugation Facility in  
>> Connecticut.
>>
>> http://www.biotech.uconn.edu/auf/
>>
>> Cheers, Petra
>>
>>
>>> Dear colleagues,
>>>
>>> does anyone know of a faciltiy for analytical ultracentrifugation?
>>>
>>> Thanks.
>>>
>>> Mike Colaneri
>>>
>>
>>
>> --
>> Petra Verdino, PhD
>> Research Associate
>> The Scripps Research Institute, BCC206
>> 10550 North Torrey Pines Road
>> CA 92037 La Jolla, USA
>> tel:1-858-784-2945
>> fax:1-858-784-2980
>> http://www.scripps.edu/~verdino/homepage.htm
>>
>