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Subject: Re: [ccp4bb] protein-protein docking programs
Date: Fri, 2 May 2008 18:11:57 +0200
Try HADDOCK.I think the way to use it will be obvious when you read the doc/papers, but do not hesitate to ask me if I can help more.I think its kind of ideal for your case.A.On May 2, 2008, at 17:18, Jerry McCully wrote:Hi, All:
Recently we solved a complex structure between two proteins, which indicated the interaction was kind of
rigid.
Therefore we want to test the binding mode of the receptor with another homologous ligand(very similar structure, RMSD 2.4 angstrom).
Can somebody recommend a sophisticated docking program to do this?
Thanks a lot.
Jerry McCully
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