Sorry, just found that the Updates hadn't copied completely to my spm
directory. Not sure why. But with replacine them it works now.
Thanks.
On Feb 7, 2008 8:45 PM, Andrew Goldfine <[log in to unmask]> wrote:
> Hi, I just installed matlab 7.5b on my Intel mac running Leopard. I
> installed spm5 and all the updates. The software starts but I get the below
> error when I try DICOM import. the error mentions the need to compile the
> software but I can't figure out how to do that (even following the wiki book
> it doesn't work since it gives me a permission error with /urs/bin/mex. Any
> idea how to get it to work?
> Thanks!
>
> Running "DICOM Import"
> Changing directory to:
> /Users/andrew/Documents/fMRIdata/12_4_07/Analysis/Rest/
> Warning: FINITE is obsolete and will be removed in future versions. Use
> ISFINITE instead.
> > In file_array.subsasgn>subfun at 95
> In file_array.subsasgn at 63
> In spm_dicom_convert>convert_mosaic at 195
> In spm_dicom_convert at 41
> In spm_config_dicom>convert_dicom at 130
> In spm_jobman>run_struct1 at 1585
> In spm_jobman>run_struct1 at 1595
> In spm_jobman>run_struct1 at 1595
> In spm_jobman>run_job at 480
> In spm_jobman>serial at 2174
> In spm_jobman at 80
> ??? Error using ==> mat2file at 16
> mat2file.c not compiled - see Makefile
>
> Error in ==> file_array.subsasgn>subfun at 125
> mat2file(sobj,dat,va{:});
>
> Error in ==> file_array.subsasgn at 63
> subfun(sobj,double(dat),args{:});
>
> Error in ==> spm_dicom_convert>convert_mosaic at 195
> dat(:,:,:) = volume;
>
> Error in ==> spm_dicom_convert at 41
> convert_mosaic(mosaic,root_dir,format);
>
> Error in ==> spm_config_dicom>convert_dicom at 130
> spm_dicom_convert(hdr,'all',root_dir,job.convopts.format);
>
> Error in ==> spm_jobman>run_struct1 at 1585
> feval(prog,val);
>
> Error in ==> spm_jobman>run_struct1 at 1595
> run_struct1(c.val{i},gui);
>
> Error in ==> spm_jobman>run_struct1 at 1595
> run_struct1(c.val{i},gui);
>
> Error in ==> spm_jobman>run_job at 480
> run_struct1(c,gui);
>
> Error in ==> spm_jobman>serial at 2174
> run_job(jobs);
>
> Error in ==> spm_jobman at 80
> serial(varargin{2:nargin});
>
> ??? Error while evaluating uicontrol Callback
>
> >>
>
> On Feb 4, 2008 7:13 AM, Torben Ellegaard Lund <[log in to unmask]> wrote:
>
> > Dear all
> >
> > There is no need to compile SPM5, and even less reason to run it on
> > via parallels, when you are using an intel mac. The necessary mexmaci
> > files are already icluded in Update 1111.
> >
> > Best
> > Torben
> >
> >
> >
> >
> > Torben Ellegaard Lund
> > Assistant Professor, PhD
> > The Danish National Research Foundation's Center for Functionally
> > Integrative Neuroscience (CFIN)
> > Aarhus University
> > Aarhus University Hospital
> > Building 30
> > Noerrebrogade
> > 8000 Aarhus C
> > Denmark
> > Phone: +4589494380
> > Fax: +4589494400
> > http://www.cfin.au.dk
> > [log in to unmask]
> >
> >
> > On 04/02/2008, at 11.09, Lilianne R. Mujica-Parodi wrote:
> >
> > > I also had a problem with this. My solution was to use Parallels.
> > > Lilly
> > > Sent via BlackBerry by AT&T
> > >
> > > -----Original Message-----
> > > From: Robert Herold <[log in to unmask]>
> > >
> > > Date: Mon, 4 Feb 2008 09:46:30
> > > To:[log in to unmask]
> > > Subject: [SPM] spm on intel mac
> > >
> > >
> > > Hello all SPM'ers,
> > > I am trying to install spm5 on an intel mac according to spm
> > > wikibooks (
> > http://en.wikibooks.org/wiki/SPM/Installation_on_Mac_OS_%28Intel%29
> > > <http://en.wikibooks.org/wiki/SPM/Installation_on_Mac_OS_%28Intel
> > > %29> ). When I run the command "make PLATFORM=Darwin.intel" I get an
> > > error message:
> > > "Makefile:158: *** Unknowm platform Darwin.intel. Stop."
> > > Has anybody experience with installation on an intel mac or a
> > > solution for the problem?
> > > My system: macosx 10.5.1, matlab 7.4 (R2007a), spm 5 with update 1111.
> > > Best regards,
> > > Robert Herold
> > > University of Pécs
> >
>
>
