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Thanks Hima! I'll wait a little and see if Steve and the gang have another option, otherwise I'll just do that. Thx! c On Jan 26, 2008 12:28 PM, Himachandra Chebrolu <[log in to unmask]> wrote: > I think I deleted all the .msf files also. I think you will be better off > deleting all the files in the FAi folder other than the scaled FA images > from the tbss_1_preproc step. I am not sure if there is a more efficient > way, but that was what I did. > > Cheers, > Hima > > *Cherif Sahyoun <[log in to unmask]>* wrote: > > Thanks Hima. Do you mean ALL the files, or just the tbss2_reg_e### temp > files? it would be a shame to restart from scratch... > > On Jan 26, 2008 11:54 AM, Himachandra Chebrolu <[log in to unmask]> > wrote: > > > I had the same problem. After much pain, I found that the .commands file > > will be deleted if you already have files from the tbss_2_reg which was run > > earlier. So I deleted all the old files in the FAi directory and then reran > > the tbss_2_reg and everything seems to work fine. Hope this helps. > > > > Cheers, > > Hima > > > > > > *Cherif Sahyoun <[log in to unmask]>* wrote: > > > > Hi, > > > > I have run tbss_2_reg -n > > when it appeared to be done I went ahead with tbss_3_postreg -S and got > > a > > series of errors (not finding certain header files). So I went back to > > look > > into the directory and indeed it seems tbss_2 exited prematurely. > > I tried to re-run it to pick up where it left off, but now got: > > wc: .commands: No such file or directory > > 28980 > > > > Any thoughts? > > > > Thanks, > > cherif > > > > > > ------------------------------ > > Looking for last minute shopping deals? Find them fast with Yahoo! > > Search.<http://us.rd.yahoo.com/evt=51734/*http://tools.search.yahoo.com/newsearch/category.php?category=shopping> > > > > > > -- > > ------------------------------------------------------------------------------------------ > Cherif P. Sahyoun HST-MEMP > > Developmental Neuroimaging of Cognitive Functions > > C: 617 688 8048 > H: 617 424 6956 > [log in to unmask] > > "Live as if this were your last day. Learn as if you'll live forever" > Ghandi > ------------------------------------------------------------------------------------------- > > > > ------------------------------ > Looking for last minute shopping deals? Find them fast with Yahoo! Search.<http://us.rd.yahoo.com/evt=51734/*http://tools.search.yahoo.com/newsearch/category.php?category=shopping> > -- ------------------------------------------------------------------------------------------ Cherif P. Sahyoun HST-MEMP Developmental Neuroimaging of Cognitive Functions C: 617 688 8048 H: 617 424 6956 [log in to unmask] "Live as if this were your last day. Learn as if you'll live forever" Ghandi -------------------------------------------------------------------------------------------