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Are you sure you are applying the fieldmap correction correctly? Do  
the images look more distorted after the correction?

T
On 12 Dec 2007, at 20:51, Megan Herting wrote:

> Hi-
>
> I am currently processing some DTI data, and I am finding that when  
> I skip
> field map correction via fugue, my FA vales are a lot larger (.78 vs.
> 1.00) in some regions of the brain, although not consistently. This
> increase in FA value is more tons  In addition, the DTI images do  
> not look
> distorted when fugue is not used. Has anyone had a similar experience?
> Anyone have a suggestion on if I should or should not field map  
> correct my
> data before running programs like TBSS?
>
> I'm not sure if it matters but we are using a 3T Siemens scanner  
> for data
> acquisition.
>
> Any suggestions would be appreciated. Thanks!
>
>
> -Megan
>