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I have almost finished converting dictionaries to new format. Biggest challenge in all these conversion is to keep backward compatibility. How to change the dictionary so that previously created dictionary works? Major unsolved problem at the moment is hydrogens. I hope to finish all these by the end of this year. Garib On 18 Dec 2007, at 09:09, Paul Emsley wrote: > William Scott wrote: >> Sometime in the not too distant past, the PDB finally changed * to >> ' (prime symbol) on nucleic acids. Is there a new version of the >> refmac library or should I globally replace all instances of * > > with ' in the library, or de-canonicalize new pdb files? > > > Currently Coot de-canonicalizes pdb files to match the dictionary :). > I will do this [1] when Coot can read 3.0 PDB files. > And that is an mmdb-thing. Hmm.... > > Paul. > > [1] I worry that converting the dictionary to 3.0 will be a big job >