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Wim Vranken wrote: > Hi Gary, > >> Is it possible to force the naming system during peak export in >> format converter (in the same way that it is possible to set the >> naming system for chemical shift output?) > > No, good point though - I didn't add it initially because there are > some issues for this with some formats (like XEASY), but if you need > it I'll add it (and it will be in the next release). In the meantime > the quick fix is: > > in ccpnmr/format/converters/DataFormat.py: > > - look for the IOkeywords dictionary (at beginning of file) > > - look for the 'writePeaks': entry in there > > - add the following line in that section (before the last > 'minimalPrompts' line!): > > 'forceNamingSystem': (None,False,'If set, will use this > naming system instead of the default one. Leave as None for default!'), > > If you want it to come up in the GUI, you have to modify the file > ccpnmr/format/general/Constants.py: > > - look for the IoSetupList list > > - look for the list starting with 'peaks' in there > > - in that section, look for the line: > > ['CheckButton','useCcpnChainInfo','Use CCPN chain and sequence > codes:',0,None], > > - add the line (before or after the above one): > > ['SelectionListWithNone','forceNamingSystem','Use naming > system:',namingSystems,None], > > > Let me know if that works for you... . > > Bye, > > Wim > > . > many thanks wim. The answer to does it work is yes! I had, ironically, already reverse engineered it this morning (and was lucky enough to guess the right answer). I had just tested it to find if it works and was amazed to find that it did when I read your message! As to do i need it, the answer is no not at the moment as it turned out the bug I was tracking was actually one inside aria... (though being able to do this did rule out one possibility and I guess it would be useful as not everything to do with nmrview works with xplor or the whatever the default output format is I guess!) regards gary -- ------------------------------------------------------------------- Dr Gary Thompson Astbury Centre for Structural Molecular Biology, University of Leeds, Astbury Building, Leeds, LS2 9JT, West-Yorkshire, UK Tel. +44-113-3433024 email: [log in to unmask] Fax +44-113-2331407 -------------------------------------------------------------------