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Dear Francisco;
This looks like a disk access problem. Are you by any chance running
this process from a NFS mounted volume ?
Is this crash reproducible, that is if you "just re-run" the task (in
the CCP4i) will it produce a crash at the exact same spot?
Can you give us more specific information on the machine you are
running flex-wARP ? Which operating system, architecture :
result of 'uname -a'
Maybe the bst is that we sort out this problem using private mails,
and when the cause is identified send a summary to the BB. Would you
agree on this way of doing?
Cordially;
Serge.
Le 15 nov. 07 à 12:02, [log in to unmask] a écrit :
> Dear All :
>
> When I run the new version of arp-warp in the ccp4i interface I got
> the
> following error. Any ideas that what I am doing wrong ??
>
> Thanks for the help.
>
> Francisco
>
> -------------------------
> ERROR ('IOError', '<no args>', [' File
> "/usr/local/arp_warp_7.0/flex-wARP-src-214/CArc.py", line 78, in
> checkAndProcess\n self.status = self.controller.checkAndProcess()
> \n', '
> File
> "/usr/local/arp_warp_7.0/flex-wARP-src-214/CNCSCrudeGenController.py",
> line 65, in checkAndProcess\n self._parse(self.logname,
> self.xmllog,
> self.stepmanager.vdict[\'logStream\'])\n', ' File
> "/usr/local/arp_warp_7.0/flex-wARP-src-214/CNCSCrudeGenController.py",
> line 106, in _parse\n f = open(xmllogname,\'r\')\n'])
> ----------------------------------------------------------------------
> ----
> ERROR => Ending JOB
> ----------------------------------------------------------------------
> ----
>
>
>
>
>
> -----------------------------------------
> Francisco J. Enguita, Ph.D.
> Host-pathogen Interactions Group
> Macromolecular Crystallography Laboratory
> ITQB
> EAN, Av. da República
> 2781-901 Oeiras
> Portugal
> Phone : +351-21-4469663
> Fax : +351-21-4433644
> E-mail : [log in to unmask]
> -----------------------------------------
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