This bug will be fixed with the next set of updates.
Volkmar
On Wed, 12 Sep 2007, [log in to unmask] wrote:
> Dear List,
>
> I am having some trouble with the dicom conversion to nii in spm5. I have 11 datasets with both
> structural and functional data, and the dicom tool fails to convert the structural scans in 6 of my
> datasets. The functionals always convert fine. I get two varieties of error messages, but they
> always start with this:
>
> Reference to non-existent field 'CSAImageHeaderInfo'.
>
> Full error messages are pasted below. I see from the archives that other people have had some
> trouble with the dicom tool, but none with this specific problem. I'm running spm5 with all the
> updates in Matlab7 R14 on a Windows XP computer. The data is from a 3T Siemens Trio scanner. Any
> thoughts would be greatly appreciated.
>
> Thank you,
> Catherine Warrier
>
>
> ***** The short error message variety:
>
> Running "DICOM Import"
> Changing directory to: C:\Cath\KidsST\Data\C08\SPM5\
> Error running job:
> Reference to non-existent field 'CSAImageHeaderInfo'.
> ??? Reference to non-existent field 'stack'.
>
> Error in ==> spm_jobman>run_struct at 1497
> for k = 1:numel(l.stack)
>
> ??? Error while evaluating uicontrol Callback.
>
>
>
> ***** The long error message variety:
>
> Running "DICOM Import"
> Changing directory to: C:\Cath\KidsST\Data\C04\SPM5\
> ??? Reference to non-existent field 'CSAImageHeaderInfo'.
>
> Error in ==> spm_dicom_convert>sort_into_volumes at 225
> if isfield(hdr{i},'CSAImageHeaderInfo') && isfield(hdr{1}.CSAImageHeaderInfo,'name')
>
> Error in ==> spm_dicom_convert>convert_standard at 205
> hdr = sort_into_volumes(hdr);
>
> Error in ==> spm_dicom_convert at 44
> convert_standard(standard,root_dir,format);
>
> Error in ==> spm_config_dicom>convert_dicom at 130
> spm_dicom_convert(hdr,'all',root_dir,job.convopts.format);
>
> Error in ==> spm_jobman>run_struct1 at 1540
> feval(prog,val);
>
> Error in ==> spm_jobman>run_struct1 at 1548
> run_struct1(c.val{i});
>
> Error in ==> spm_jobman>run_struct1 at 1548
> run_struct1(c.val{i});
>
> Error in ==> spm_jobman>run_job at 469
> run_struct1(c);
>
> Error in ==> spm_jobman>serial at 2128
> run_job(jobs);
>
> Error in ==> spm_jobman at 76
> serial(varargin{2:nargin});
>
> ??? Error while evaluating uicontrol Callback.
>
>
> ~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-
> Catherine Warrier, PhD
> Research Assistant Professor, Knowles Fellow
> Auditory Neuroscience Laboratory
> Northwestern University
> ~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-~-
>
--
Volkmar Glauche
-
Department of Neurology [log in to unmask]
Universitaetsklinikum Freiburg Phone 49(0)761-270-5331
Breisacher Str. 64 Fax 49(0)761-270-5416
79106 Freiburg http://fbi.uniklinik-freiburg.de/
