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Hello,

That error was at the tail end of the update, when it was trying to run
Analysis, so if that was the only error then it looks like it ought to
have installed 1.0.15, and so presumably that is your working version
(look in
/data1/software/src/CCPN/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Version.py
to confirm).  Now I just looked at the 1.0.15 release and at the code on
the update server and neither has that import bug in it, so this is
puzzling, and I'm wondering where that PeakBasic came from.

The easiest way for you to get restarted would probably be to edit
/data1/software/src/CCPN/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/PeakBasic.py
and to remove getPeakDimAtomTuple from the import statement.  Then see if
it starts ok.

There are now two scripts, updateCheck and updateAll, which belong in the
ccpnmr/bin directory.  The first one will run the update server code
separately from Analysis in its graphical environment (so the usual
popup).  The second one will just update all your code to the most recent
versions without asking (so no graphical environment).

If you ran the 1.0.15 installCode.py then you should have these two
scripts already in your ccpnmr/bin directory.  Otherwise, I've attached
them and you can add yourself.

These two scripts might or might not help with your immediate problem.

Wayne

On Wed, 29 Aug 2007, eiso wrote:

> hi
>
>
> I recently tried to update analysis from v 1.0.12 via the GUI.
> That somehow failed halfway and now I can't start analysis anymore.
> It gives me the error message below. Same happens after
> running python installCode.py analysis again. (but only
> recompiling analysis)
>
> what would be the least painfull way to get it running again.
> Is there a way to resume the update from the command line?
>
> Eiso
>
>
> Creating the bin directory
> Run Analysis (as test) (y or n)? y
> Traceback (most recent call last):
>    File
> "/data1/software/src/CCPN/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/AnalysisGui.py",
> line 72, in ?
>      from ccpnmr.analysis.AnalysisPopup import AnalysisPopup
>    File
> "/data1/software/src/CCPN/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/AnalysisPopup.py",
> line 92, in ?
>      from ccpnmr.analysis.Analysis                      import Analysis
>    File
> "/data1/software/src/CCPN/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/Analysis.py", line
> 75, in ?
>      from ccpnmr.analysis import MarkBasic
>    File
> "/data1/software/src/CCPN/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/MarkBasic.py", line
> 52, in ?
>      from ccpnmr.analysis.WindowBasic import getSpectrumWindowView
>    File
> "/data1/software/src/CCPN/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/WindowBasic.py",
> line 53, in ?
>      from ccpnmr.analysis.PeakBasic import getPeakDimPosition
>    File
> "/data1/software/src/CCPN/ccpnmr/ccpnmr1.0/python/ccpnmr/analysis/PeakBasic.py", line
> 56, in ?
>      from ccpnmr.analysis.AssignmentBasic import isShiftInRange, assignResToDim,
> makePeakDimAnnotation, \
> ImportError: cannot import name getPeakDimAtomTuple
>  >>>
>  >
>