For the fdt pipeline:
1) When I run bedpost, my nodif image should NOT be brain extracted (i.e., it should still have the skull on?)
(what, if anything, will go wrong if no_dif IS brain extracted?)
2) However, when I run registration, my nodif image and my struct should be brain extracted versions.
Thanks,
Dianne
--
Dianne Patterson, Ph.D.
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ERP Lab
University of Arizona
621-3256 (Office)