BY the way, is there a way to display the LUT in fslview and maybe
attach min and max for the purpose of making pictures for publication?
Stefano Marenco, MD
GCAP, Clinical Brain Disorders Branch,
NIMH
10 Center Drive, room 4S235
Bethesda, MD 20892
tel. (301) 435-8964
fax. (301) 480-7795
email: [log in to unmask]
-----Original Message-----
From: Mark Jenkinson [mailto:[log in to unmask]]
Sent: Wednesday, January 17, 2007 3:32 AM
To: [log in to unmask]
Subject: Re: [FSL] fslview lut tables
Hi,
The difficulty is getting the display range in FSLView right, as it maps
the colours
to intensities based on the display range selected. So if your
intensities range from
1 to 7, then need the display range to be 0 to 8 in order to get the
correct mapping
as well as a colour table of length 8. Otherwise you wont see either
the first colour
in the table or the last.
I just made such a colour map which displayed fine here.
The file is shown below.
Hope this helps.
All the best,
Mark
%!VEST-LUT
%%BeginInstance
<<
/SavedInstanceClassName /ClassLUT
/PseudoColorMinimum 0.00
/PseudoColorMaximum 1.00
/PseudoColorMinControl /Low
/PseudoColorMaxControl /High
/PseudoColormap [
<-color{0.000000,0.000000,0.000000}->
<-color{1.000000,0.000000,0.000000}->
<-color{1.000000,1.000000,0.000000}->
<-color{0.000000,1.000000,0.000000}->
<-color{0.000000,1.000000,1.000000}->
<-color{0.000000,0.000000,1.000000}->
<-color{1.000000,0.000000,1.000000}->
<-color{1.000000,1.000000,1.000000}->
]
>>
%%EndInstance
%%EOF
On Tue, 16 Jan 2007 01:03:38 +0000, N.M. van Strien
<[log in to unmask]> wrote:
>Hi,
>
>I am attempting to create a mask in fslview which has 7 different
>subregions. However, I can only display four distinct colours at the
moment.
>After reviewing the mailing list and trying some time, I have failed to
>create a new .lut file for fslview. I just don't seem to get what the
>numbers mean. Changing them will change the colours, but always in an
>unexpected manner. Also I failed to add more colours. Can you provide
me
>with a description of how I would create a lut file with seven (or
more)
>distinct colours?
>
>Thanks,
>
>Niels van Strien
>===========================================================
=============
