I am attempting to build FSL, but miscmaths fails to build, leading to
other errors in the make. Until miscmaths, everything seems to compile
perfectly.
Making project src/miscmaths
make: Warning: File
`/fs/plum1_share6/mikefsl/fsl/config/x86_64-unknown-linux-gnu-gcc4.1.1/externallibs.mk' has modification time 3.5e+03 s in the
future
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o miscmaths.o miscmaths.cc
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
miscmaths.cc: In function â??NEWMAT::ReturnMatrixX
MISCMATHS::corrcoef(const NEWMAT::Matrix&, int)â??:
miscmaths.cc:1725: error: â??SPâ?? was not declared in this scope
miscmaths.cc: In function â??void MISCMATHS::ols(const
NEWMAT::Matrix&, const NEWMAT::Matrix&, const NEWMAT::Matrix&,
NEWMAT::Matrix&, NEWMAT::Matrix&)â??:
miscmaths.cc:1949: error: â??SPâ?? was not declared in this scope
make: *** [miscmaths.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o optimise.o optimise.cc
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
optimise.cc: In function â??float
MISCMATHS::optimise(NEWMAT::ColumnVector&, int, const
NEWMAT::ColumnVector&, float (*)(const NEWMAT::ColumnVector&), int&,
int, const NEWMAT::ColumnVector&)â??:
optimise.cc:337: error: â??SPâ?? was not declared in this scope
make: *** [optimise.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o miscprob.o miscprob.cc
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
make: *** [miscprob.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o kernel.o kernel.cc
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
make: *** [kernel.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o histogram.o histogram.cc
In file included from
/usr/local/lib/gcc/x86_64-unknown-linux-gnu/4.1.1/../../../../include/c++/4.1.1/backward/iostream.h:31,
from
/fs/plum1_share6/mikefsl/fsl/extras/include/newmat/include.h:110,
from
/fs/plum1_share6/mikefsl/fsl/extras/include/newmat/newmat.h:8,
from
/fs/plum1_share6/mikefsl/fsl/extras/include/newmat/newmatap.h:8,
from histogram.h:77,
from histogram.cc:69:
/usr/local/lib/gcc/x86_64-unknown-linux-gnu/4.1.1/../../../../include/c++/4.1.1/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header. Please consider using one of the 32 headers found in section 17.4.1.2 of the C++ standard. Examples include substituting the <X> header for the <X.h> header for C++ includes, or <iostream> instead of the deprecated header <iostream.h>. To disable this warning use
-Wno-deprecated.
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
make: *** [histogram.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o base2z.o base2z.cc
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o t2z.o t2z.cc
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o f2z.o f2z.cc
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o volume.o volume.cc
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o volumeseries.o
volumeseries.cc
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
make: *** [volumeseries.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o minimize.o minimize.cc
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
minimize.cc: In function â??void MISCMATHS::scg(NEWMAT::ColumnVector&,
const MISCMATHS::gEvalFunction&, NEWMAT::ColumnVector&, float, float,
int)â??:
minimize.cc:457: error: â??SPâ?? was not declared in this scope
make: *** [minimize.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o cspline.o cspline.cc
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
make: *** [cspline.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o sparse_matrix.o
sparse_matrix.cc
In file included from
/usr/local/lib/gcc/x86_64-unknown-linux-gnu/4.1.1/../../../../include/c++/4.1.1/backward/iostream.h:31,
from
/fs/plum1_share6/mikefsl/fsl/extras/include/newmat/include.h:110,
from
/fs/plum1_share6/mikefsl/fsl/extras/include/newmat/newmat.h:8,
from sparse_matrix.h:73,
from sparse_matrix.cc:76:
/usr/local/lib/gcc/x86_64-unknown-linux-gnu/4.1.1/../../../../include/c++/4.1.1/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header. Please consider using one of the 32 headers found in section 17.4.1.2 of the C++ standard. Examples include substituting the <X> header for the <X.h> header for C++ includes, or <iostream> instead of the deprecated header <iostream.h>. To disable this warning use
-Wno-deprecated.
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
make: *** [sparse_matrix.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o sparsefn.o sparsefn.cc
In file included from
/usr/local/lib/gcc/x86_64-unknown-linux-gnu/4.1.1/../../../../include/c++/4.1.1/backward/iostream.h:31,
from
/fs/plum1_share6/mikefsl/fsl/extras/include/newmat/include.h:110,
from
/fs/plum1_share6/mikefsl/fsl/extras/include/newmat/newmat.h:8,
from sparse_matrix.h:73,
from sparsefn.cc:76:
/usr/local/lib/gcc/x86_64-unknown-linux-gnu/4.1.1/../../../../include/c++/4.1.1/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header. Please consider using one of the 32 headers found in section 17.4.1.2 of the C++ standard. Examples include substituting the <X> header for the <X.h> header for C++ includes, or <iostream> instead of the deprecated header <iostream.h>. To disable this warning use
-Wno-deprecated.
miscmaths.h: In function â??float MISCMATHS::dot(const
NEWMAT::ColumnVector&, const NEWMAT::ColumnVector&)â??:
miscmaths.h:171: error: â??SPâ?? was not declared in this scope
make: *** [sparsefn.o] Error 1
c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations
-I/fs/plum1_share6/mikefsl/fsl/extras/include/newmat
-I/fs/plum1_share6/mikefsl/fsl/extras/include/libprob
-I/fs/plum1_share6/mikefsl/fsl/extras/include/zlib -I.
-I/fs/plum1_share6/mikefsl/fsl/include
-I/fs/plum1_share6/mikefsl/fsl/include -c -o rungekutta.o
rungekutta.cc
make: Target `all' not remade because of errors.
make: warning: Clock skew detected. Your build may be incomplete.
=========================
ERROR::Could not make miscmaths successfully
