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Thanks Adam, by following these instructions, I figured it out. I needed to put some lines in my .bashrc file. thanks, AJ By the way, have you used FSL to coregister MRI images? --- "Thomas, Adam (NIH/NIMH) [E]" <[log in to unmask]> wrote: > Hi AJ, > > You'll need to make sure fsl is in your path. How > you do this depends on > what platform you are installing on. There are > fairly detail > instructions for each platform on the "Downloading" > page: > http://www.fmrib.ox.ac.uk/fsl/fsl/downloading.html > > Cheers, > -Adam > > > -----Original Message----- > From: Adil Javed [mailto:[log in to unmask]] > Sent: Wednesday, August 02, 2006 11:01 PM > To: [log in to unmask] > Subject: [FSL] FSL installation > > Hello, > I am new to FSL. I just downloaded and extracted FSL > using gunzip and tar as per instructions, which > worked > fine. > > The main fsl folder is located in /usr/local/ > When I type under [root@localhost fsl]# fsl it > tells > me bash: fsl: command not found. > > What am I doing wrong and how do i fix it. > Thanks, > AJ >