Mark
Thanks for the help. It no builds some successfully but still fails.
Any other thoughts would be appreciated. Couldn't attach the whole
build log because it said the file was too large but below is the
beginning and end of the file. Thank you very much once again.
Chis
./MAKE
using FSLDIR as /home/local/fsl
Making project zlib
ar -r libz.a adler32.o compress.o crc32.o gzio.o uncompr.o deflate.o
trees.o zutil.o inflate.o infblock.o inftrees.o infcodes.o infutil.o
inffast.o
make[1]: Entering directory `/home/local/fsl/extras/src/zlib'
make[2]: Entering directory `/home/local/fsl/extras/src/zlib'
ar -r libz.a adler32.o compress.o crc32.o gzio.o uncompr.o deflate.o
trees.o zutil.o inflate.o infblock.o inftrees.o infcodes.o infutil.o
inffast.o
make[2]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[2]: Entering directory `/home/local/fsl/extras/src/zlib'
make[3]: Entering directory `/home/local/fsl/extras/src/zlib'
Installing stable binaries
make[3]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[3]: Entering directory `/home/local/fsl/extras/src/zlib'
make[4]: Entering directory `/home/local/fsl/extras/src/zlib'
Installing stable header files
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 deflate.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 infblock.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 infcodes.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 inffast.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 inffixed.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 inftrees.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 infutil.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 trees.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 zconf.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 zlib.h /home/local/fsl/extras/include/zlib/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 zutil.h /home/local/fsl/extras/include/zlib/
make[4]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[4]: Entering directory `/home/local/fsl/extras/src/zlib'
Installing stable library archives
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 libz.a /home/local/fsl/extras/lib
make[4]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[4]: Entering directory `/home/local/fsl/extras/src/zlib'
Installing tcl scripts
make[4]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[4]: Entering directory `/home/local/fsl/extras/src/zlib'
Installing (userguide) documents
/bin/chmod -R ug+w /home/local/fsl/extras/doc/zlib/
make[4]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[4]: Entering directory `/home/local/fsl/extras/src/zlib'
Installing reference documents
/bin/chmod -R ug+w /home/local/fsl/extras/refdoc/zlib/
make[4]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[4]: Entering directory `/home/local/fsl/extras/src/zlib'
make[4]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[3]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[2]: Leaving directory `/home/local/fsl/extras/src/zlib'
make[1]: Leaving directory `/home/local/fsl/extras/src/zlib'
-------------------------
Successfully made zlib
Making project libpng
make: Nothing to be done for `all'.
make[1]: Entering directory `/home/local/fsl/extras/src/libpng'
make[2]: Entering directory `/home/local/fsl/extras/src/libpng'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[2]: Entering directory `/home/local/fsl/extras/src/libpng'
make[3]: Entering directory `/home/local/fsl/extras/src/libpng'
Installing stable binaries
make[3]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[3]: Entering directory `/home/local/fsl/extras/src/libpng'
make[4]: Entering directory `/home/local/fsl/extras/src/libpng'
Installing stable header files
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 png.h /home/local/fsl/extras/include/libpng/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 pngasmrd.h /home/local/fsl/extras/include/libpng/
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 pngconf.h /home/local/fsl/extras/include/libpng/
make[4]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[4]: Entering directory `/home/local/fsl/extras/src/libpng'
Installing stable library archives
install: illegal option -- p
usage: install [-cs] [-g group] [-m mode] [-o owner] file ...
destination
install -d [-g group] [-m mode] [-o owner] dir
install -p -m 0664 libpng.a /home/local/fsl/extras/lib
make[4]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[4]: Entering directory `/home/local/fsl/extras/src/libpng'
Installing tcl scripts
make[4]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[4]: Entering directory `/home/local/fsl/extras/src/libpng'
Installing (userguide) documents
/bin/chmod -R ug+w /home/local/fsl/extras/doc/libpng/
make[4]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[4]: Entering directory `/home/local/fsl/extras/src/libpng'
Installing reference documents
/bin/chmod -R ug+w /home/local/fsl/extras/refdoc/libpng/
make[4]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[4]: Entering directory `/home/local/fsl/extras/src/libpng'
make[4]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[3]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[2]: Leaving directory `/home/local/fsl/extras/src/libpng'
make[1]: Leaving directory `/home/local/fsl/extras/src/libpng'
-------------------------
Successfully made libpng
and ends
ERROR::Could not make tbss successfully
!!ERROR in BUILD!!
Could not make the following projects successfully:
utils niftiio fslio miscmaths newimage libss libvis meshclass bint avwutils bet bet2 cluster fdt feat5 film filmbabe flame flirt fugue mcflirt melodic2 misc_c miscvis mm randomise siena slicetimer susan tbss
On Mon, 2006-11-13 at 18:19 +0000, Mark Jenkinson wrote:
> Hi,
>
> The first part says that it is using a generic config which is
> potentially very bad. This shouldn't happen if you did step 3
> in the compiling instructions at:
> http://www.fmrib.ox.ac.uk/fsl/fsl/compiling.html
>
> The errors at the end are pretty disastrous in that really
> nothing was built OK. This is probably because it failed to
> build, or even more likely - install - the extras packages.
>
> So go and check step 3 of the compiling instructions and
> make a specific config directory, then check that the values
> of the variables in systemvars.mk file (within your specific
> config directory) have sensible settings - especially the
> INSTALL variable. If it is set to "ginstall" check that your
> system has ginstall. If not, set it to "install" (assuming
> that you have this).
>
> All the best,
> Mark
>
>
>
> On 13 Nov 2006, at 15:53, Christopher C wrote:
>
> > I am trying to compile FSL on a SunBlade1000 with Solaris 10. I went
> > through the compiling instructions but when I attempt to build
> > with ./bui
> > ld
> > I get errors. I tried to attact the build.log file but it is too
> > large.
> >
> > The build.log file begins:
> >
> > WARNING: Did not find specific configuration for
> > sparc-sun-solaris2.9-gcc3.1 - trying generic version instead
> > ./MAKE
> > using FSLDIR as /home/local/fsl
> >
> > and ends
> >
> > ERROR::Could not make tbss successfully
> >
> > !!ERROR in BUILD!!
> > Could not make the following projects successfully:
> > utils niftiio fslio miscmaths newimage libss libvis meshclass bint
> > avwutils bet bet2 cluster fast fdt feat5 film filmbabe flame flirt
> > fugue
> > mcflirt melodic2 misc_c miscvis mm randomise siena slicetimer susan
> > tbss
> >
> > Any help would be greatly appreciated.
> > Thank you
> > Chris
