Dear List

Post-installation of these two updates I get the following error when trying to run the WFU pickatlas at the point of specifying "Pickatlas gui" in Results (note: Matlabpath has /usr/local/spm2/toolbox/wfu before /usr/local/spm2):

**********************************************************************************
SPM2: spmresults_ui (v2.42)             16:38:59 - 10/01/2005
SPM2: wfu_spm_getspm2 (v2.50)  16:39:00 - 10/01/2005
--------------------------------------------------------

??? Error: file: /usr/local/spm2/toolbox/wfu/wfu_pickatlastype.m Line: 24 Coumn: 26
"SelectedAtlasType" was previously used as a variable,
conflicting with its use here as the name of a function

Error in ==> wfu_pickatlas>Initialize at 92
        handles.SelectedAtlasType=wfu_pickatlastype;

Error in ==> wfu_pickatlas at 20
        Initialize(fig, [], handles, varargin{:})

Error in ==> wfu_pickatlas_getSPM2 at 285
                [wfu_atlas_region, wfu_atlas_mask,wfu_atlas_filename]=wfu_pickatlas(atlas_mask_filename);

Error in ==> spm_getSPM at 11
                [SPM, xSPM]=wfu_spm_getSPM2;

Error in ==> spm_results_ui at 260
[SPM,xSPM] = spm_getSPM;

??? Error while evaluating uicontrol Callback
***********************************************************************************

Any idea what's causing this, and how I fix it?

Regards - MFG

> -----Original Message-----
> From: SPM (Statistical Parametric Mapping)
> [mailto:[log in to unmask]] On Behalf Of Thomas E Nichols
> Sent: Wednesday, December 22, 2004 11:07 AM
> To: [log in to unmask]
> Subject: Re: [SPM] WFU Pickatlas, Tom Nichol's conjunction
> analysis and Matlab search paths...
>
> Paul, Andrew, Joseph, and other Conjunction users,
>
> Karl Friston and I have corresponded on a way to unify his
> views on conjunctions with my views.  As a result we have
> produced a revised set of conjunction modifications, which,
> thanks to Karl, are actually simplier and result in fewer
> lines of modified code.
>
> If you download & install just these two files into a
> standard SPM2 release
>
>         ftp://ftp.fil.ion.ucl.ac.uk/spm/spm2_updates/spm_getSPM.m
>         ftp://ftp.fil.ion.ucl.ac.uk/spm/spm2_updates/spm_uc_FDR.m
>
> you will get new conjunction capabilities and can abandon the
> use of my conjunction modifications.
>
>
> With these modifications you can use any of
>
>       Global Null       Ho: 0 effects true
>       Conjunction Null  Ho: as many as K-1 effects true
>       Intermediate Null Ho: as many as 0<k<K-1 effects true.
>
> which imply different alternatives...
>
>       Global Alt       Ha: 1 or more effects true
>       Conjunction Alt  Ha: all effects true
>       Intermediate Alt Ha: k+1 or more effects true
>
> Karl has a manuscript explaining the intermediate method
> which I'm sure he'd be happy to post if he hasn't done so
> already (Karl?).
>
> -Tom
>
>
>     -- Thomas Nichols --------------------   Department of
> Biostatistics
>        http://www.sph.umich.edu/~nichols     University of Michigan
>        [log in to unmask]                     1420 Washington Heights
>     --------------------------------------   Ann Arbor, MI 48109-2029
>