Hello, I want to reorient some images so that they display in their subject space in the conventional orientation thereby making it easier to identify locations from an atlas. So I would like to control this by hand. thanks, Jason. On Tue, 18 May 2004, Stephen Smith wrote: > Hi Jason - maybe just use FLIRT to register to the standard space > template? Does that give you what you want? Or did you want to control > this by hand? > > Cheers. > > > On Wed, 12 May 2004, Jason Steffener wrote: > > > Hello. > > I have high resolution anatomical images collected in an ''odd'' > > orientation. I would like to rotate them relative to the AC-PC plane and > > create new image isn this orientation. Is there any way to determine how > > much to rotate the images and then how to apply the rotations? > > thank you, > > Jason. > > > > Jason Steffener > > Department of Radiology > > New Jersey Medical School > > Biomedical Engineering Department > > New Jersey Institute of Technology > > Newark, NJ USA > > (973) 676-1000 x1545 > > http://web.njit.edu/~jrs3 > > > > Stephen M. Smith DPhil > Associate Director, FMRIB and Analysis Research Coordinator > > Oxford University Centre for Functional MRI of the Brain > John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK > +44 (0) 1865 222726 (fax 222717) > > [log in to unmask] http://www.fmrib.ox.ac.uk/~steve > Jason Steffener Department of Radiology New Jersey Medical School Biomedical Engineering Department New Jersey Institute of Technology Newark, NJ USA (973) 676-1000 x1545 http://web.njit.edu/~jrs3