Hi again,
In running FEAT on a rather large dataset (just over 1300 volumes), but a
very simple block design, the FEAT report contains no results, just an image
of the design matrix. The log in FEATwatcher seems to have some errors;
looks like certain files cannot be accessed, but these seem to be files that
FEAT itself created. I am pasting that output below. I have run FEAT
successfully many many times before.
Any help in sorting this out will be much appreciated.
Thanks,
Michael
Started FEAT at Wed Dec 22 15:49:54 EST 2004 on lipton-dt
/bin/cp /tmp/feat_002388.fsf design.fsf
/usr/local/fsl/bin/feat_model design
Total original volumes = 1310
/usr/local/fsl/bin/avwroi /home/lipton/data/20041221Clyde/fmrib example_func
655 1
/usr/local/fsl/bin/betfunc /home/lipton/data/20041221Clyde/fmrib
prefiltered_func_data_bet
/usr/local/fsl/bin/ip prefiltered_func_data_bet filtered_func_data 10 -s
2.12314225053 -m mask -I 10000 -t 20.0 -1 | grep THRESHOLD | awk '{ print
}' -
1000.000000
rm -rf prefiltered_func_data*
/usr/local/fsl/bin/film_gls -rn stats -sa -ms 5 -sp
/usr/local/fsl/bin/susan_smooth filtered_func_data design.mat 1000.000000
Log directory is: stats
Loading image...Signal 6
/usr/local/fsl/bin/contrast_mgr stats design.con
AvwOpen: Error while opening header!: No such file or directory
Signal 11
Rendering using zmin=2.3 zmax=8
/usr/local/fsl/bin/tsplot . -f filtered_func_data
Cannot open volume ./stats/pe1.hdr for reading!
mkdir tsplot
Finished FEAT at Wed Dec 22 16:00:38 EST 2004
To view the FEAT report point your web browser at
C:/cygwin/home/lipton/data/20041221Clyde/fmrib.feat/report.html
