Hi Tim, I'ce pasted the command line below.I think it's not clear so I'ce included a text filw where I pasted the command in one single line. Thanks, Hima. #!/bin/csh / /usr/local/fsl/bin/bet /u/home/mristu/chebrolu/data/firstscans/P17837/d17837_mod /u/home/mristu/chebrolu/data/firstscans/P17837/d17837brain88145100 -c 88 145 100 --- Tim Behrens <[log in to unmask]> wrote: > Hi Hima - > > this looks right. > Can you copy and paste the actual command that > didn't work into an email > please? > > Thanks > > Tim > > > On Thu, 26 Feb 2004, Himachandra Chebrolu wrote: > > > Hello Tim, > > This is the format I've been using > > > > bet <input path> <output Path> -c 90 145 100 > > > > It worked when I used the default parameters, > > > > bet <input path> <output Path> -f 0.5 -g 0 > > > > Thanks, > > Hima. > > > > --- Tim Behrens <[log in to unmask]> wrote: > > > Hiya - > > > what was the command line you actually ran? > > > > > > Thanks > > > Tim > > > > > > On Wed, 25 Feb 2004, Himachandra Chebrolu wrote: > > > > > > > Hi All, > > > > I'm trying to run the BET specifying the > center of > > > the > > > > brain.During my previous session it worked > > > fine,but > > > > today I don't understand,it runs but does'nt > give > > > any > > > > output file.I tried it with the default > parameters > > > and > > > > it worked fine.It is giving the output.Has > anyone > > > > encontered a similar problem? > > > > Thanks, > > > > -Hima. > > > > > > > > __________________________________ > > > > Do you Yahoo!? > > > > Yahoo! Mail SpamGuard - Read only the mail you > > > want. > > > > http://antispam.yahoo.com/tools > > > > > > > > > > -- > > > > > > ------------------------------------------------------------------------------- > > > Tim Behrens > > > Centre for Functional MRI of the Brain > > > The John Radcliffe Hospital > > > Headley Way Oxford OX3 9DU > > > Oxford University > > > Work 01865 222782 > > > Mobile 07980 884537 > > > > > > ------------------------------------------------------------------------------- > > > > > > ===== > > Himachandra Chebrolu > > University Of Kentucky > > Lexington,KY-40506 > > > > __________________________________ > > Do you Yahoo!? > > Get better spam protection with Yahoo! Mail. > > http://antispam.yahoo.com/tools > > > > -- > ------------------------------------------------------------------------------- > Tim Behrens > Centre for Functional MRI of the Brain > The John Radcliffe Hospital > Headley Way Oxford OX3 9DU > Oxford University > Work 01865 222782 > Mobile 07980 884537 > ------------------------------------------------------------------------------- ===== Himachandra Chebrolu University Of Kentucky Lexington,KY-40506 __________________________________ Do you Yahoo!? Get better spam protection with Yahoo! Mail. http://antispam.yahoo.com/tools