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Hi - no, we didn;t change anything in these files - maybe your original download was incomplete/corrupted. Cheers. On Thu, 21 Oct 2004, Matthew Hoptman wrote: > I changed $FSLDIR/etc/fslconf/fsl.sh to fsl.sh.old and deleted > $HOME/.fslconf/fsl.sh. By the way, I then reverted > $FSLDIR/etc/fslconf/fsl.sh.old to fsl.sh and it worked. > > After I got your email, I reinstalled FSL (from fsl-3.2-redhat9.tar.gz), > reinstalled the patch and sourced $FSLDIR/etc/fslconf/fsl.sh and everything > worked fine. Could something in the patch have fixed this? > > On Tue, 19 Oct 2004 07:24:18 +0100, Mark Jenkinson <[log in to unmask]> wrote: > > >Hi Matthew, > > > >I'm confused. > >Which file did you rename to fsl.sh.old? > >Where was it located? > > > >The straightforward installation should not create > >an infinite loop and we are quite concerned that > >others might have this problem. > > > >Can you please send us more details of where you > >installed fsl, how you did your setup and what > >you did to fix it? > > > >Thanks, > > Mark > > > > > >On 19 Oct 2004, at 00:34, Matthew Hoptman wrote: > > > >> Hi, > >> I seem to have gotten the script to work. I must have set up some > >> an > >> infinite loop, and when I renamed the script to fsl.sh.old, voila, it > >> worked. > -- Stephen M. Smith DPhil Associate Director, FMRIB and Analysis Research Coordinator Oxford University Centre for Functional MRI of the Brain John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK +44 (0) 1865 222726 (fax 222717) [log in to unmask] http://www.fmrib.ox.ac.uk/~steve