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The genetic epidemiology group at the University of Leicester
is offering the following MRC-funded PhD project to work with
Professors John Thompson and Paul Burton on the following topic:

Modelling non-random ascertainment in genetic family data

Brief Description:

Studies of the genetics of complex diseases, such as asthma and 
ischaemic heart disease, often rely on recruiting families of 
subjects. It is rarely possible to recruit families at random, 
however other methods of sampling can lead to a severe form of 
selection bias known as ascertainment bias. For instance, 
ascertainment bias arises if families are only sampled when at 
least one member is affected and so at-risk families with no 
affected members are unobserved. Statistical models for 
addressing the problems of ascertainment bias involve 
high-dimensional integration and are very difficult to 
implement fully even using the latest Markov Chain Monte Carlo 
(MCMC) methods. To compound the problem, published work from 
the Genetic Epidemiology Group in Leicester has demonstrated 
that some modified MCMC approaches that are practical, do 
not produce full adjustment for the bias. This PhD project 
would build on this work in order to understand better why 
practical MCMC methods sometimes fail and then to develop 
improved methods for adjusting for the ascertainment bias. 
The problem will be tackled from two complementary directions: 
(a) fitting conventional models by maximum likelihood or 
MCMC methods that simulate pseudo-observations to reflect 
the unobserved families; (b) post-processing the estimated 
parameters from approximate MCMC analyses to improve the 
adjustment for ascertainment bias. Real and simulated 
data sets will be used to assess the performance of the 
various approaches.


The stipend is the usual £12,000 tax-free per annum. Knowledge of
genetics is not essential if the candidate has a good background in 
Mathematics/Statistics and is interested in biological applications. 
The topic is also suitable for a numerate biologist who perhaps
has a Master's Degree with a substantial statistics component.
However,  these are only rough guidelines and we would encourage 
anyone who is at all interested to contact John Thompson at
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Nuala A. Sheehan,
Department of Epidemiology and Public Health,
University of Leicester,
22-28 Princess Road West,
Leicester LE1 6TP, UK

Tel: +44 (0)116 2525456
Fax: +44 (0)116 2523272
Email: [log in to unmask]