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At the risk of exposing my total ignorance, I would like to ask for some

advice about interpretation of results of SPM99 analysis of PET and
SPECT data.

Can you recommend any papers which describe (preferably in language
intelligible to a non-statistician) how to decide
(i) what height and extent thresholds to set
(ii) if the height threshold should be for p uncorrected or corrected
(iii) then, from the list of reported regions, whether to report as
'significant' only regions which have p<0.05 (or whatever) at the voxel
level or only those which have p < whatever at the cluster level
(iv) whether the p values used in stage (iii) should be corrected or
uncorrected

I had understood that the purpose of the corrected p was to correct for
the difference between the much higher probability of a significant
statistic at any voxel in the brain, and the much lower probability of
significance at any one specific voxel, so that existence of a prior
hypothesis about the location of an effect would be justification for
using uncorrected p values to examine for an effect at that location.

In the literature, I see that people typically use thresholds of p<0.05
or p<0.01, but beyond that there seems to be a lot of diversity for
comparable types of studies as to whether people used p corrected or
uncorrected (even without prior hypotheses), and this, as well as other
details, including the height and extent thresholds, which can impact on
the regions listed, are sometimes not specified at all.  Any comments on
this apparently confusing situation?

Any help would be appreciated.

Nanette
--
Nanette Chana Freedman, Ph.D.
Hadassah University Hospital
Department of Medical Biophysics and Nuclear Medicine
Kiryat Hadassah
P.O.B. 12000
91120 Jerusalem, ISRAEL
Tel:  972 2 6776 720 (work)
Fax: 972 2 6421 203 (work)
Tel: 972 2 5636 174 (home)
Email:  [log in to unmask]