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Dear Tracy,

> When I display the beta values in Matlab window I get two values (for a
> fMRI study with one condition), for example 0.7530 and 168.4075. What
> do these correspond to? Also, how does this relate to the fitted
> response values in Y.mad?

I imagine one is your activation (0.75%) and the other is the constant
(163) term for that voxel (average over all voxels = 100).  These are
the parameter estimates which, when applied to the regressors, create
the fitted response.  The data in Y.mad are the raw data (not fitted
responses).

I hope this helps - Karl