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BUGS  1998

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Subject:

FW: converting classic BUGS programs and data into the new WinBUG S

From:

Brian Griner <[log in to unmask]>

Reply-To:

Brian Griner <[log in to unmask]>

Date:

Sat, 14 Nov 1998 18:15:48 -0500

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (223 lines)

Ok it my turn to be confused.  I have converted one of my programs into
WinBUGS and I was told by the program that the model was syntactically
correct.  I got the rectangular array data loaded (BTW, you can not have
any extra variables in the data that are not in the model and the case
of the variable names matter).  However, when I compile the model, I get
an error trap message (although once I got 'Multiple definitions of R
node).  I may try writing out the R matrix (what a drag) to see if it
works.

Any help would be greatly appreciated! (I am under a deadline to submit
a paper).

Thanks, Brian

PS:  Has anyone successfully used the trick with the equals function and
the loop indexes?  Maybe that's my problem.

________________________________
Brian P. Griner, Ph.D.
Manager, Telemarketing Modeling
ORC International
PO Box 183
Princeton, NJ 08542
Phone: 908.281.3566
Fax: 	908.281.5103
Email: 	[log in to unmask]
________________________________


# Prime Option Conjoint Analysis for Tier 2 Risk Group

# Random Coefficients Ordered Logit 

 {

 for(p in 1:11629) {

	RATE[p] ~ dcat(pr[,1:5]);

	# Cumulative probability of > rating j

	for (k in 1:4) {

	logit(Q[p,k]) <- ( beta[SUBJECT[p],1] + delta[k] - 
	
					    (
beta[SUBJECT[p],2]*NAPR1[p] +
	
beta[SUBJECT[p],3]*NAPR2[p] +
	
beta[SUBJECT[p],4]*NAPR4[p] +
	
beta[SUBJECT[p],5]*NAPR5[p] +
	
beta[SUBJECT[p],6]*NTIM1[p] +
	
beta[SUBJECT[p],7]*OAPR1[p] +
	
beta[SUBJECT[p],8]*OAPR2[p] +
	
beta[SUBJECT[p],9]*OAPR4[p] +
	
beta[SUBJECT[p],10]*NCSH2[p] +
	
beta[SUBJECT[p],11]*CRTE1[p] +
	
beta[SUBJECT[p],12]*CTRN1[p] +
	
beta[SUBJECT[p],13]*BAPR2[p] +
	
beta[SUBJECT[p],14]*BAPR3[p] )

                              )

      			    }

	# Probability of observing rating j
	
			pr[p,1] <- Q[p,1];
		
		for(k in 2:4) {

			pr[p,k] <- Q[p,k] - Q[p,k-1];

				   }

			pr[p,5] <- 1 - Q[p,4];

		}

    for(i in 1:401) {

                                beta[i,1:14] ~
dmnorm(mu.beta[1:14],d[1:14,1:14]);
      
                     }
                
# thresholds

        delta[1] <- 0;
        delta[2] <- g[1];
        delta[3] <- g[1] + g[2];
        delta[4] <- g[1] + g[2] + g[3];
        
# priors

        g[1]~dnorm(0,0.01)I(0,);
        g[2]~dnorm(0,0.01)I(0,);
        g[3]~dnorm(0,0.01)I(0,);

    for(k in 1:14) {
        mu.beta[k]~dnorm(0,.01);
                          }
        
   	d[1:14,1:14]~dwish(R[14,14],14);
	   sigma2.beta[1:14,1:14] <- inverse(d[1:14,1:14],14,14);
        
  for(i in 1:14) {
      for(j in 1:14) {
          R[i,j] <- equals(i,j);
                           }
                        }
}


		Here is the informative error message I got.

TRAP 126  (not yet implemented)

 BugsNodes.CreateLogical   [00000793H] 
	.expression	BugsParser.Node	NIL
	.res	INTEGER	0
	.statement	BugsParser.Statement	[01210D90H] 
	.string	ARRAY 80 OF CHAR	""   ...
	.variable	BugsParser.Variable	[01210B40H] 
	.vector	GraphNodes.Vector	Fields
 BugsNodes.IterateOverLoops   [000006DAH] 
	.Do	PROCEDURE	BugsNodes.CreateLogical
	.i	INTEGER	15
	.loop	BugsParser.Iterator	NIL
	.lower	INTEGER	1
	.res	INTEGER	0
	.statement	BugsParser.Statement	[01210D90H] 
	.string	ARRAY 80 OF CHAR	""   ...
	.upper	INTEGER	14
 BugsNodes.CreateLogicals   [00000835H] 
	.res	INTEGER	0
	.source	BugsParser.Statement	[01210FC0H] 
	.statement	BugsParser.Statement	[01210D90H] 
	.string	ARRAY 80 OF CHAR	""   ...
 BugsCompiler.WriteGraph   [00000488H] 
	.dev	GraphNodes.Node	NIL
	.deviance	Dialog.String	""   ...
	.name	BugsNames.Name	NIL
	.optimize	BOOLEAN	TRUE
	.res	INTEGER	0
	.source	BugsParser.Statement	[01210FC0H] 
	.string	ARRAY 80 OF CHAR	""   ...
 BugsCmds.WriteGraph   [000004DAH] 
	.errorNum	ARRAY 80 OF CHAR	0E942X, "t", 0E8C4X,
"t", 164BX, "·", 0E90CX, "t", 198X, "¶", 754X, 2184X   ...
	.numNodes	INTEGER	14748147
	.res	INTEGER	0
	.string	ARRAY 80 OF CHAR	""   ...
 StdInterpreter.CallProc   [000003B5H] 
	.a	BOOLEAN	FALSE
	.b	BOOLEAN	FALSE
	.c	BOOLEAN	FALSE
	.ok	BOOLEAN	TRUE
	.parType	INTEGER	0
 StdInterpreter.Command   [00000ECAH] 
	.ptype	INTEGER	0
 StdInterpreter.Call   [00000FF1H] 
	.ch	CHAR	0X
	.i	INTEGER	20
	.i0	INTEGER	0
	.i1	INTEGER	0
	.res	INTEGER	0
	.type	INTEGER	3
	.x	INTEGER	0
 Dialog.Call   [00001A20H] 
	.res	INTEGER	0
 StdDialog.HandleItem   [000007FCH] 
	.i	StdDialog.Item	[010F6C10H] 
	.res	INTEGER	0
 HostMenus.HandleCustomMenu   [00001FA5H] 
	.i	StdDialog.Item	[010F6C10H] 
	.id	INTEGER	385
	.m	HostMenus.Menu	[010F64D0H] 
 HostMenus.MenuCommand   [00002126H] 
	.i	HostMenus.Item	NIL
	.id	INTEGER	385
	.lParam	INTEGER	0
	.old	INTEGER	5390
	.res	INTEGER	0
	.wParam	INTEGER	385
	.wnd	INTEGER	3396
 Kernel.Try   [000031A0H] 
	.a	INTEGER	3396
	.b	INTEGER	385
	.c	INTEGER	0
	.h	PROCEDURE	HostMenus.MenuCommand
 HostMenus.ApplWinHandler   [000032C3H] 
	.Proc	PROCEDURE	NIL
	.hit	BOOLEAN	FALSE
	.lParam	INTEGER	0
	.message	INTEGER	273
	.oldp	BOOLEAN	FALSE
	.pps	POINTER	NIL
	.pr	POINTER	NIL
	.res	INTEGER	0
	.s	STRING	"¡"
	.w	INTEGER	0
	.wParam	INTEGER	385
	.wnd	INTEGER	3396
<system>   (pc=BFF73662H,  fp=0074F8BCH)
<system>   (pc=BFF92893H,  fp=0074F8D0H)
<system>   (pc=0074890BH,  fp=BFF71A79H)
		


%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

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