Oh sorry, maybe I’ve misunderstood, is it not available from the command line either?
E
> On 5. Apr 2024, at 17:38, Euan Pyle <[log in to unmask]> wrote:
>
> Hi Marc,
> While it has disappeared from the GUI (for now) you can still use it via the command line and it should still work.
>
> relion_tomo_import_particles --i [your_input_star_file] --t [your_tomogram_star_file] --o [chosen_output_directory]
>
> Best,
> Euan
>
>> On 5. Apr 2024, at 17:26, Marc Ruff <[log in to unmask]> wrote:
>>
>> Dear,
>> I am using the last update of relion relion5 (5.0-beta-2-commit-a0b145) to process tomograms.
>> I generated the tomograms in relion5 and everything is working well. After I used cryolo for particle picking and I tried to import the coordinates in relion with the aim to do sub-tomogram averaging.
>>
>> But the import particle option is not availlable anymore.
>>
>> Last time, with the precedent version of relion5, I did in cryolo:
>>
>> cryolo_boxmanager_tools.py coords2star -i cryolo/Particles/SCALECOORDS/ -o scalecoords --relion4
>>
>> And I imported the particles to relion using "relion_tomo_import_particles" and it worked OK.
>>
>> But in the last update, the tomo import particles is no more available.
>>
>> How can I import the particles coordinates in this last version ?
>>
>> Thank you for your help
>> Best,
>> Marc
>>
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