Hello,
Any help with this would be greatly appreciated.
I am trying to define thresholds for binarizing a mask, and I need the mean and the standard deviation of the voxel intensities in both grey and white matter (separately) for a normalized/bias corrected MRI image. I was told that these values are provided as a part of the segmentation algorithm, but I am unable to find them anywhere (in both Segment and Old Segment). I was thinking to compute the values using the probability maps, but those values are meaningless since the intensity is almost homogenously white. Am I missing something in the segmentation output or is there a way to calculate these values?
Thanks so much in advance,
Jasmine
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