Hi Takanori,
Ok, thanks so much for trying. What version of cmake would you recommend using?
KR,
Sam
> On 10 Jun 2022, at 13:51, Takanori Nakane <[log in to unmask]> wrote:
>
> Hi,
>
> I'm sorry but I give up.
>
> It is hard to debug because I cannot reproduce this locally.
> Probably this depends on the CMake version.
>
> I think one can work around this by setting CFLAGS and LDFLAGS
> (and/or NVCC equivalents of them) directly but I cannot test myself.
>
> Best regards,
>
> Takanori Nakane
>
> On 2022/06/10 21:43, Samuel Haysom [RPG] wrote:
>> Hi Takanori,
>> With both in the cmake stage the compilation gets much further but then fails again with a similar error.
>> $ cmake .. -DTIFF_INCLUDE_DIRS="/localhome/bssfh/libtiff/usr/local/include/" -DTIFF_INCLUDE_DIR="/localhome/bssfh/libtiff/usr/local/include/" -DTIFF_LIBRARY="/localhome/bssfh/libtiff/usr/local/lib64/libtiff.so.5”
>> $ VERBOSE=1 make -j1
>> I haven’t included all the logs because it gets really long but here is the point it failed:
>> [ 62%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_backprojector.cu.o
>> cd /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda && /usr/bin/cmake -E make_directory /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/.
>> cd /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda && /usr/bin/cmake -D verbose:BOOL=1 -D build_configuration:STRING=Release -D generated_file:STRING=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_backprojector.cu.o -D generated_cubin_file:STRING=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_backprojector.cu.o.cubin.txt -P /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.cmake
>> -- Removing /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_backprojector.cu.o
>> /usr/bin/cmake -E remove /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_backprojector.cu.o
>> -- Generating dependency file: /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.NVCC-depend
>> /absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/bin/nvcc -M -D__CUDACC__ /localhome/bssfh/relion4/relion/src/acc/cuda/cuda_backprojector.cu -o /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.NVCC-depend -ccbin /usr/bin/cc -m64 -DINSTALL_LIBRARY_DIR=/usr/local/lib/ -DSOURCE_DIR=/localhome/bssfh/relion4/relion/src/ -DACC_CUDA=2 -DACC_CPU=1 -D_CUDA_ENABLED -DHAVE_SINCOS -DHAVE_TIFF -DHAVE_PNG -Xcompiler ,\"-O3\",\"-DNDEBUG\" -arch=sm_50 -D__INTEL_COMPILER --default-stream per-thread --std=c++11 --disable-warnings -DNVCC -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include -I/usr/include/openmpi-x86_64 -I/localhome/bssfh/relion4/relion -I/usr/include -I/localhome/bssfh/relion4/relion/external/fltk/include -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include
>> -- Generating temporary cmake readable file: /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.depend.tmp
>> /usr/bin/cmake -D input_file:FILEPATH=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.NVCC-depend -D output_file:FILEPATH=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.depend.tmp -P /usr/share/cmake/Modules/FindCUDA/make2cmake.cmake
>> -- Copy if different /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.depend.tmp to /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.depend
>> /usr/bin/cmake -E copy_if_different /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.depend.tmp /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.depend
>> -- Removing /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.depend.tmp and /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.NVCC-depend
>> /usr/bin/cmake -E remove /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.depend.tmp /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_backprojector.cu.o.NVCC-depend
>> -- Generating /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_backprojector.cu.o
>> /absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/bin/nvcc /localhome/bssfh/relion4/relion/src/acc/cuda/cuda_backprojector.cu -c -o /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_backprojector.cu.o -ccbin /usr/bin/cc -m64 -DINSTALL_LIBRARY_DIR=/usr/local/lib/ -DSOURCE_DIR=/localhome/bssfh/relion4/relion/src/ -DACC_CUDA=2 -DACC_CPU=1 -D_CUDA_ENABLED -DHAVE_SINCOS -DHAVE_TIFF -DHAVE_PNG -Xcompiler ,\"-O3\",\"-DNDEBUG\" -arch=sm_50 -D__INTEL_COMPILER --default-stream per-thread --std=c++11 --disable-warnings -DNVCC -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include -I/usr/include/openmpi-x86_64 -I/localhome/bssfh/relion4/relion -I/usr/include -I/localhome/bssfh/relion4/relion/external/fltk/include -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include
>> Generated /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_backprojector.cu.o successfully.
>> /usr/bin/cmake -E cmake_progress_report /localhome/bssfh/relion4/relion/build/CMakeFiles
>> [ 62%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o
>> cd /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda && /usr/bin/cmake -E make_directory /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/.
>> cd /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda && /usr/bin/cmake -D verbose:BOOL=1 -D build_configuration:STRING=Release -D generated_file:STRING=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o -D generated_cubin_file:STRING=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o.cubin.txt -P /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.cmake
>> -- Removing /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o
>> /usr/bin/cmake -E remove /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o
>> -- Generating dependency file: /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.NVCC-depend
>> /absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/bin/nvcc -M -D__CUDACC__ /localhome/bssfh/relion4/relion/src/acc/cuda/cuda_benchmark_utils.cu -o /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.NVCC-depend -ccbin /usr/bin/cc -m64 -DINSTALL_LIBRARY_DIR=/usr/local/lib/ -DSOURCE_DIR=/localhome/bssfh/relion4/relion/src/ -DACC_CUDA=2 -DACC_CPU=1 -D_CUDA_ENABLED -DHAVE_SINCOS -DHAVE_TIFF -DHAVE_PNG -Xcompiler ,\"-O3\",\"-DNDEBUG\" -arch=sm_50 -D__INTEL_COMPILER --default-stream per-thread --std=c++11 --disable-warnings -DNVCC -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include -I/usr/include/openmpi-x86_64 -I/localhome/bssfh/relion4/relion -I/usr/include -I/localhome/bssfh/relion4/relion/external/fltk/include -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include
>> -- Generating temporary cmake readable file: /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.depend.tmp
>> /usr/bin/cmake -D input_file:FILEPATH=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.NVCC-depend -D output_file:FILEPATH=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.depend.tmp -P /usr/share/cmake/Modules/FindCUDA/make2cmake.cmake
>> -- Copy if different /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.depend.tmp to /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.depend
>> /usr/bin/cmake -E copy_if_different /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.depend.tmp /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.depend
>> -- Removing /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.depend.tmp and /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.NVCC-depend
>> /usr/bin/cmake -E remove /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.depend.tmp /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_benchmark_utils.cu.o.NVCC-depend
>> -- Generating /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o
>> /absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/bin/nvcc /localhome/bssfh/relion4/relion/src/acc/cuda/cuda_benchmark_utils.cu -c -o /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o -ccbin /usr/bin/cc -m64 -DINSTALL_LIBRARY_DIR=/usr/local/lib/ -DSOURCE_DIR=/localhome/bssfh/relion4/relion/src/ -DACC_CUDA=2 -DACC_CPU=1 -D_CUDA_ENABLED -DHAVE_SINCOS -DHAVE_TIFF -DHAVE_PNG -Xcompiler ,\"-O3\",\"-DNDEBUG\" -arch=sm_50 -D__INTEL_COMPILER --default-stream per-thread --std=c++11 --disable-warnings -DNVCC -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include -I/usr/include/openmpi-x86_64 -I/localhome/bssfh/relion4/relion -I/usr/include -I/localhome/bssfh/relion4/relion/external/fltk/include -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include
>> Generated /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_benchmark_utils.cu.o successfully.
>> /usr/bin/cmake -E cmake_progress_report /localhome/bssfh/relion4/relion/build/CMakeFiles
>> [ 62%] Building NVCC (Device) object src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_helper_functions.cu.o
>> cd /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda && /usr/bin/cmake -E make_directory /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/.
>> cd /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda && /usr/bin/cmake -D verbose:BOOL=1 -D build_configuration:STRING=Release -D generated_file:STRING=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_helper_functions.cu.o -D generated_cubin_file:STRING=/localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_helper_functions.cu.o.cubin.txt -P /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_helper_functions.cu.o.cmake
>> -- Removing /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_helper_functions.cu.o
>> /usr/bin/cmake -E remove /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_helper_functions.cu.o
>> -- Generating dependency file: /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_helper_functions.cu.o.NVCC-depend
>> /absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/bin/nvcc -M -D__CUDACC__ /localhome/bssfh/relion4/relion/src/acc/cuda/cuda_helper_functions.cu -o /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/relion_gpu_util_generated_cuda_helper_functions.cu.o.NVCC-depend -ccbin /usr/bin/cc -m64 -DINSTALL_LIBRARY_DIR=/usr/local/lib/ -DSOURCE_DIR=/localhome/bssfh/relion4/relion/src/ -DACC_CUDA=2 -DACC_CPU=1 -D_CUDA_ENABLED -DHAVE_SINCOS -DHAVE_TIFF -DHAVE_PNG -Xcompiler ,\"-O3\",\"-DNDEBUG\" -arch=sm_50 -D__INTEL_COMPILER --default-stream per-thread --std=c++11 --disable-warnings -DNVCC -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include -I/usr/include/openmpi-x86_64 -I/localhome/bssfh/relion4/relion -I/usr/include -I/localhome/bssfh/relion4/relion/external/fltk/include -I/absl/EM/emsoftware2/env-modules/install/cuda/9.2.148/include
>> In file included from /localhome/bssfh/relion4/relion/src/projector.h:25:0,
>> from /localhome/bssfh/relion4/relion/src/ml_model.h:23,
>> from /localhome/bssfh/relion4/relion/src/ml_optimiser.h:33,
>> from /localhome/bssfh/relion4/relion/src/acc/cuda/cuda_helper_functions.cu:3:
>> /localhome/bssfh/relion4/relion/src/image.h:58:20: fatal error: tiffio.h: No such file or directory
>> #include <tiffio.h>
>> ^
>> compilation terminated.
>> CMake Error at relion_gpu_util_generated_cuda_helper_functions.cu.o.cmake:206 (message):
>> Error generating
>> /localhome/bssfh/relion4/relion/build/src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_helper_functions.cu.o
>> make[2]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/__/acc/cuda/./relion_gpu_util_generated_cuda_helper_functions.cu.o] Error 1
>> make[2]: Leaving directory `/localhome/bssfh/relion4/relion/build'
>> make[1]: *** [src/apps/CMakeFiles/relion_gpu_util.dir/all] Error 2
>> make[1]: Leaving directory `/localhome/bssfh/relion4/relion/build'
>> make: *** [all] Error 2
>>> On 10 Jun 2022, at 13:08, Takanori Nakane <[log in to unmask]> wrote:
>>>
>>> Hi,
>>>
>>> How about setting them both?
>>>
>>> Takanori
>>>
>>> On 2022/06/10 21:07, Samuel Haysom [RPG] wrote:
>>>> Hi Takanori,
>>>> It then fails at the cmake stage with the following output:
>>>> -- The C compiler identification is GNU 4.8.5
>>>> -- The CXX compiler identification is GNU 4.8.5
>>>> -- Check for working C compiler: /usr/bin/cc
>>>> -- Check for working C compiler: /usr/bin/cc -- works
>>>> -- Detecting C compiler ABI info
>>>> -- Detecting C compiler ABI info - done
>>>> -- Check for working CXX compiler: /usr/bin/c++
>>>> -- Check for working CXX compiler: /usr/bin/c++ -- works
>>>> -- Detecting CXX compiler ABI info
>>>> -- Detecting CXX compiler ABI info - done
>>>> -- BUILD TYPE set to the default type: 'Release'
>>>> -- Setting fallback CUDA_ARCH=50
>>>> -- CUDA enabled - Building CUDA-accelerated version of RELION
>>>> -- Setting cpu precision to double
>>>> -- Setting accelerated code precision to single
>>>> -- Found CUDA: /usr/local/cuda (found version "7.5")
>>>> -- Using cuda wrapper to compile....
>>>> -- Cuda version is >= 7.5 and single-precision build, enable double usage warning.
>>>> -- Found MPI_C: /usr/lib64/openmpi/lib/libmpi.so
>>>> -- Found MPI_CXX: /usr/lib64/openmpi/lib/libmpi_cxx.so;/usr/lib64/openmpi/lib/libmpi.so
>>>> -- MPI_INCLUDE_PATH : /usr/include/openmpi-x86_64
>>>> -- MPI_LIBRARIES : /usr/lib64/openmpi/lib/libmpi_cxx.so;/usr/lib64/openmpi/lib/libmpi.so
>>>> -- MPI_CXX_INCLUDE_PATH : /usr/include/openmpi-x86_64
>>>> -- MPI_CXX_LIBRARIES : /usr/lib64/openmpi/lib/libmpi_cxx.so;/usr/lib64/openmpi/lib/libmpi.so
>>>> -- CMAKE_C_COMPILER : /usr/bin/cc
>>>> -- CMAKE_CXX_COMPILER : /usr/bin/c++
>>>> -- MPI_C_COMPILER : /usr/lib64/openmpi/bin/mpicc
>>>> -- MPI_CXX_COMPILER : /usr/lib64/openmpi/bin/mpicxx
>>>> -- CMAKE_CXX_COMPILER_ID : GNU
>>>> -- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so
>>>> -- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found
>>>> -- Looking for gethostbyname
>>>> -- Looking for gethostbyname - found
>>>> -- Looking for connect
>>>> -- Looking for connect - found
>>>> -- Looking for remove
>>>> -- Looking for remove - found
>>>> -- Looking for shmat
>>>> -- Looking for shmat - found
>>>> -- Looking for IceConnectionNumber in ICE
>>>> -- Looking for IceConnectionNumber in ICE - found
>>>> -- Found X11: /usr/lib64/libX11.so
>>>> -- Could NOT find FLTK (missing: FLTK_LIBRARIES FLTK_INCLUDE_DIR)
>>>> -- No FLTK installation was found
>>>> -- Found previously built non-system FLTK libraries that will be used.
>>>> -- FLTK_INCLUDE_DIR: /localhome/bssfh/relion4/relion/external/fltk/include
>>>> -- FLTK_LIBRARIES: /localhome/bssfh/relion4/relion/external/fltk/lib/libfltk.so
>>>> -- Found FFTW
>>>> -- FFTW_PATH: /usr/include
>>>> -- FFTW_INCLUDES: /usr/include
>>>> -- FFTW_LIBRARIES: /usr/lib64/libfftw3f.so;/usr/lib64/libfftw3.so
>>>> -- Looking for sincos
>>>> -- Looking for sincos - found
>>>> -- Looking for __sincos
>>>> -- Looking for __sincos - not found
>>>> CMake Error at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:108 (message):
>>>> Could NOT find TIFF (missing: TIFF_INCLUDE_DIR)
>>>> Call Stack (most recent call first):
>>>> /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:315 (_FPHSA_FAILURE_MESSAGE)
>>>> /usr/share/cmake/Modules/FindTIFF.cmake:40 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
>>>> CMakeLists.txt:351 (find_package)
>>>
>
########################################################################
To unsubscribe from the CCPEM list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCPEM&A=1
This message was issued to members of www.jiscmail.ac.uk/CCPEM, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
|