Dear Yuqian,
please can you try the new release 12.8-beta, where also an updated JulichBrainatlas v 2.6 is implemented.
Best,
Christian
On Fri, 28 May 2021 01:40:39 +0100, Yuqian Yang <[log in to unmask]> wrote:
>Dear CAT12 expert,
>
>For the VBM ROI analysis, I would like to create the auditory and motor cortex masks using CAT12-space Julichbrain atlas, which can be found in the "templates_volumes" folder.
>However, when I applied the label names from the corresponding Julichbrain CSV file, the area TE1.0, TE2.1, and TE2.2 of the right hemisphere were missing.
>Also, according to the CSV file, label 182 should have represented area 4a but it actually showed in area STS1.
>The code I used was listed below:
>
> >Vol = spm_vol('C:\Program_Files\spm12\toolbox\cat12\templates_volumes\julichbrain.nii');
> >img = spm_read_vols(Vol);
> >label_of_interest=[181,182,89,90];
> >for i=1:length(label_of_interest)
> img(img==label_of_interest(i))=999;
> >end
> >img(img<999)= 0;
> >img (img==999)=1;
> >Vol.fname = '4a_4p_bi_CAT12space_210527.nii';
> >spm_write_vol(Vol,img);
>
>The latest 12.7 version of CAT12 was used.
>I am wondering if I have done anything wrong.
>Any suggestions would be highly appreciated.
>Thank you so much in advance.
>
>Best wishes,
>Yuqian Yang
>
>
>
>_______________________________________________
>
>Yuqian YANG
>Institute of Neuroscience and Medicine (INM-3)
>Forschungszentrum Juelich
>Leo-Brandt-Str.5
>52425 Juelich, Germany
>
>Email: [log in to unmask]
>Telefon: +49 2461/61-85313
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