Dear Juuso,
it's clearly indicated that v93 is necessary. There is a readme.txt and the name of the standalone zip-file is named with R2017b (which is v93). Anyway, you can try to compile SPM12+CAT12 by following these instructions:
https://en.wikibooks.org/wiki/SPM/Standalone
Best,
Christian
On Wed, 16 Jun 2021 06:56:41 +0000, Korhonen Juuso <[log in to unmask]> wrote:
>Hi,
>
>
>running spm works just fine with: /home/juuso/Desktop/spm12/run_spm12.sh /usr/local/MATLAB/MATLAB_Runtime/v97
>
>So I don't think that the problem is with the spm folder. Is there an issue using v97, because I plan to run this on a server which only has v97 installed. At least cat12 website says it supports that version of Matlab. Do I have to compile the cat12 somehow before running it?
>
>
>Br. Juuso
>
>________________________________
>L�hett�j�: Christian Gaser <[log in to unmask]>
>L�hetetty: 12. kes�kuuta 2021 2:23:38
>Vastaanottaja: [log in to unmask]; Korhonen Juuso
>Aihe: Re: Error while doing segmentation with the standalone version
>
>Dear Juuso,
>
>On Fri, 11 Jun 2021 13:45:00 +0000, Korhonen Juuso <[log in to unmask]> wrote:
>
>>Hi,
>>
>>
>>When running:
>>
>>
>>sudo /home/juuso/Desktop/cat12/standalone/cat_standalone.sh /home/juuso/Desktop/standalonetest/test.nii -s /home/juuso/Desktop/spm12 -m /usr/local/MATLAB/MATLAB_Runtime/v97 -b /home/juuso/Desktop/cat12/standalone/cat_standalone_segment.m
>
>My first guess is that you use the standard SPM12 version (and not the standalone version) or the spm12 folder is not correct.
>Besides that, I wonder why you have to call the standalone tool as administrator and why you are using MCR v97 instead of v93 as indicated in the help text.
>
>Best,
>
>Christian
>
>>
>>
>>I get the following error:
>>
>>
>>Item tools: No field(s) named
>>cat
>>Execution failed: /tmp/cat_44256.m
>>Bye for now...
>>
>>Error using spm_jobman>fill_run_job (line 472)
>>No executable modules, but still unresolved dependencies or incomplete module inputs.
>>Error in fill_run_job (line 472)
>>Error in spm_jobman (line 247)
>>Error in spm_standalone (line 101)
>>
>>I can't seem to figure it out where it goes wrong. I downloaded the spm12 and cat12 to my desktop separately. I also downloaded the matlab runtime version 9.7 as it supposed to work with the spm12 version I downloaded (spm12_r7771). Could this still be a problem with the versions? I don't quite understand the CAT12 toolbox (compiled within SPM12 if installed) in the requirements of the cat_standalone.sh manual
>>
>>Br. Juuso
>>
>
>
>
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