Dear Maddy,
this sounds quite unusual. Please can you check the txt-files in the report folder for any errors that probably occurred after saving the mri results but before preparing the PDF report and the xml-files after the quality check.
Best,
Christian
On Sun, 28 Feb 2021 11:28:53 +0000, Maddy Vinther <[log in to unmask]> wrote:
>Hi all,
>
>I have ran a segmentation batch script on 1000 brain scans with spm cat12 toolbox - i got all the outputs in the mri folder so there were no errors however I only got a cat report for quality control for 20 of the scans? Can anyone theorise why that might be?
>
>Thank you,
>
>Maddy
>
>University of Edinburgh
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