Hi,
I'm trying to install FSL 6.03 on my mac (MBP 2018, os Catalina (10.15.4). I repatedly run into the following error:
By installing this python distribution you agree to the license terms in
/usr/local/fsl/fslpython/LICENSE.txt
100%
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 188: /usr/local/fsl/fslpython/bin/conda: No such file or directory
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 189: /usr/local/fsl/fslpython/bin/conda: No such file or directory
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 190: /usr/local/fsl/fslpython/bin/conda: No such file or directory
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 191: /usr/local/fsl/fslpython/bin/conda: No such file or directory
Stage 2
100%
Failed to create FSL Python environment - see /var/folders/wd/zhktfvxx0hz6zypsxrvx6w240000gn/T/fslpythonXXXX.17rqg8Ft/fslpython_miniconda_installer.log for details
Post install setup failed
The installer log displays the following message:
Installing FSL conda distribution into /usr/local/fsl/fslpython
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 203: /usr/local/fsl/fslpython/bin/conda: No such file or directory
Tried to reinstall several times (also with /usr/bin/python) as suggested on another post.
Also tried to run $FSLDIR/etc/fslconf/fslpython_install.sh -f $FSLDIR which results in the original error:
By installing this python distribution you agree to the license terms in
/usr/local/fsl/fslpython/LICENSE.txt
100%
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 188: /usr/local/fsl/fslpython/bin/conda: No such file or directory
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 189: /usr/local/fsl/fslpython/bin/conda: No such file or directory
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 190: /usr/local/fsl/fslpython/bin/conda: No such file or directory
/usr/local/fsl/etc/fslconf/fslpython_install.sh: line 191: /usr/local/fsl/fslpython/bin/conda: No such file or directory
Stage 2
100%
Failed to create FSL Python environment - see /var/folders/wd/zhktfvxx0hz6zypsxrvx6w240000gn/T/fslpythonXXXX.Y5O7peWK/fslpython_miniconda_installer.log for details
Any help would be greatly appreciated!
Many thanks,
Oskari
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