Dear all,
I am a neurologist (almost, last year trainee) and this is my first time I am working with MRI.
I have collected and worked with EEG recorded from stroke patients, but now I would like to normalise their brain MRI in order to mask the lesion and perform precise signal EEG analysis. I have just routine MRI collected in .dcom format, without any subfolders as T1, T2, DWI, etc.
I have read many manuals and listened to many tutorials, I have tried, but I am unable to find this basic, but fundamental information:
1. How can I organize an MRI dataset based on a list of .dcom files?
2. How can I understand which .nii file I have to use in order to get a correct images?
3. Do I need to do something in particular to blend axial, sagittal and coronal?
I perfectly know that it is a very basic and for most of you stupid message, but I don't know how to go forward.
Any help or suggestions are being to be super accepted.
Thanks,
Luca
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