Hi there,
Please see my files below:
acqparams.txt:
```
0 1 0 0.084
0 -1 0 0.084
```
indext.txt: (first 22 volumes-->1, last 22 volumes-->2)
```
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
```
dwi.bval
```
0.0
100.0
100.0
100.0
100.0
100.0
100.0
400.0
400.0
400.0
400.0
400.0
400.0
400.0
0.0
400.0
400.0
400.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
0.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
900.0
0.0
```
I am running eddy_openmp version 6.0.1 with default settings plus --data-is-shelled argument. However, I am running into the following error:
```
Reading images
Performing volume-to-volume registration
Running Register
Loading prediction maker
Evaluating prediction maker model
Calculating parameter updates
...
...
...
Iter: 4, Total mss = 56.4411
Running sm.ApplyB0LocationReference
Running sm.PolateB0MovPar
Running Register
Loading prediction maker
Evaluating prediction maker model
Estimated hyperparameters: 2.641723
0.508588
7.184131
5.452815
4.450307
Calculating parameter updates
Iter: 0, Total mss = 7.184342
Running sm.ApplyDWILocationReference
EDDY::: ECScanManager::GetGlobal2DWIIndexMapping: Global index not dwi
EDDY::: ECScanClasses.cpp::: unsigned int EDDY::ECScanManager::GetGlobal2DWIIndexMapping(unsigned int) const: Exception thrown
EDDY::: ECScanClasses.h::: void EDDY::ECScanManager::ApplyDWILocationReference(): Exception thrown
EDDY::: Eddy failed with message EDDY::: eddy.cpp::: EDDY::ReplacementManager* EDDY::DoVolumeToVolumeRegistration(const EDDY::EddyCommandLineOptions&, EDDY::ECScanManager&): Exception thrown
```
Any insight on how this may have occurred?
Best,
Tashrif
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