Dear experts,
Im trying to register a T1W skull stripped group average to MNI - which in a perfect world would be simple!- GUI won't do it so I'm using bash- I've typed the following command
flirt -in GROUP_AVERAGE_T1w-SS.nii -ref mni_icbm152_t1_tal_nlin_sym09a.nii outvol.nii -omat GROUP_AVERAGE2MNI.mat -dof6
and I get the error unrecognised option o
No idea what it means- thoughts?
Thanks,
F
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