Dear Fatima,
CAT12 was probably not correctly installed in the spm12/toolbox folder. Please check again the instructions on the Brainstorm tutorial. The cat12 files can be found here:
http://dbm.neuro.uni-jena.de/cat12/
Best,
Christian
On Mon, 18 Nov 2019 11:48:21 +0100, fatemeh shekoohi <[log in to unmask]> wrote:
>Hi,
>I am writing to tell you that I am doing cortical parcellation with CAT12.
>I am doing according this guideline(
>https://neuroimage.usc.edu/brainstorm/Tutorials/SegCAT12 ) , but I got a
>error . The error is that ( Error using bst_spm_init (line 114)
>Please download and install the SPM12 toolbox "CAT12":
>http://www.neuro.uni-jena.de/vbm/download/
>
>Error in process_segment_cat12>Compute (line 101)
> bst_spm_init(isInteractive, 'cat12');
>
>Error in process_segment_cat12>ComputeInteractive (line 265)
> [isOk, errMsg] = Compute(iSubject, iAnatomy, nVertices, 1);
>
>Error in process_segment_cat12 (line 27)
>eval(macro_method);
>
>Error in
>tree_callbacks>@(h,ev)process_segment_cat12('ComputeInteractive',iSubject,iAnatomy)
>(line 1015)
> gui_component('MenuItem', jPopup, [], 'CAT12 MRI
>segmentation', IconLoader.ICON_SURFACE_CORTEX, [],
> @(h,ev)process_segment_cat12('ComputeInteractive',
>iSubject, iAnatomy));
>
>
>I updated the software, but I got the error again. Could you please kindly
>let me know how I can do cortical parcellation with cat without any proble.
> Many thanks in advance
>Best
>Fatima
>
>--
>
>With warmest regards,
>Fatemeh
>
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