Dear FSL experts,
I am writing to ask about an issue that started occurring a week ago.
Whenever I run an FSL command (I tried using fslmaths, FAST and FLIRT) the routine runs smoothly but the output image only contains two or three slices (the lower ones). Everything else in the image is set to zero. I have never encountered this issue, so I was wondering if this is a known bug.
With many thanks for your help and best wishes,
Emma
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