Dear Antonin,
thanks for your help with this. Your suggestion that the NaN might be the culprit made it really easy to find and fix the problem. As of next release it won’t crash as a result of NaN in pixdim4.
J
> On 23 Oct 2019, at 21:52, Antonin Skoch <[log in to unmask]> wrote:
>
> Dear Jesper,
>
> I have uploaded the files.
> Meanwhile, I saw on the mrtrix3 forum, that this error was most probably caused by NaN value in pixdim4 of NIfTI header of eddy_in.nii file.
>
> See https://community.mrtrix.org/t/eddys-estimate-move-by-susceptibility-option-causing-crash-on-denoised-data/2754/25
>
> Could that be the case?
>
> Antonin
>
>
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