Hi,
Thank you for your reply. Fyi, I have already tried that both direction which are 1 0 0 and 0 1 0. Unfortunately, it states that error like this :
Topup: msg=topup_clp::topup_clp: Mismatch between 004Tensor.nii and acqparams.txt
So, any other reasons or idea how to resolve this problem?
Thank you.
-----Original Message-----
From: FSL - FMRIB's Software Library <[log in to unmask]> On Behalf Of SUBSCRIBE FSL Anonymous.
Sent: Monday, 23 September, 2019 10:59 PM
To: [log in to unmask]
Subject: Re: [FSL] Run Eddy and Topup
By writing 1 1 0, you are indicating that phase encoding and thus the distortion happened in both the x and y axes (left/right and top/bottom).
Typically, it should just be one direction 1 0 0 or 0 1 0 so that x^2 + y^2 + z^2 = 1.
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