Hi Paul,
I am on Ubuntu 16.04 and the FSL version is 6.0.1. Here is the output fslhd on the tensor image:
filename 000001/FW_FW_TensorCorrected.nii.gz
size of header 348
data_type FLOAT32
dim0 4
dim1 127
dim2 127
dim3 59
dim4 6
dim5 1
dim6 1
dim7 1
vox_units mm
time_units ms
datatype 16
nbyper 0
bitpix 4
pixdim0 1.000000
pixdim1 2.000000
pixdim2 2.000000
pixdim3 2.000000
pixdim4 1000.000000
pixdim5 0.000000
pixdim6 0.000000
pixdim7 0.000000
vox_offset 352
cal_max 0.003257
cal_min -0.001780
scl_slope 0.000000
scl_inter 0.000000
phase_dim 0
freq_dim 0
slice_dim 2
slice_name Unknown
slice_code 0
slice_start 0
slice_end 0
slice_duration 0.000000
toffset 0.000000
intent Unknown
intent_code 0
intent_name huh? n+1
intent_p1 0.000000
intent_p2 0.000000
intent_p3 0.000000
qform_name Scanner Anat
qform_code 1
qto_xyz:1 2.000000 0.000000 0.000000 3.129409
qto_xyz:2 0.000000 2.000000 0.000000 1.990937
qto_xyz:3 0.000000 0.000000 2.000000 1.994001
qto_xyz:4 0.000000 0.000000 0.000000 1.000000
qform_xorient Left-to-Right
qform_yorient Posterior-to-Anterior
qform_zorient Inferior-to-Superior
sform_name Scanner Anat
sform_code 1
sto_xyz:1 2.000000 0.000000 0.000000 3.129409
sto_xyz:2 0.000000 2.000000 0.000000 1.990937
sto_xyz:3 0.000000 0.000000 2.000000 1.994001
sto_xyz:4 0.000000 0.000000 0.000000 1.000000
sform_xorient Left-to-Right
sform_yorient Posterior-to-Anterior
sform_zorient Inferior-to-Superior
file_type NIFTI-1+
file_code 1
descrip FreeSurfer matlab
aux_file
Thank you for your help!
Niranjana
Niranjana Shashikumar, MS
Neuroimaging Analyst
Vanderbilt Memory & Alzheimer's Center
Vanderbilt University Medical Center
1207 17th Avenue South, 2nd Floor, Suite 204
Nashville, TN 37212-2838
www.vanderbiltalzheimers.com
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