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DLPOLY  August 2019

DLPOLY August 2019

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Subject:

Re: Run a MD simulation of a single atom

From:

Alin Marin Elena <[log in to unmask]>

Reply-To:

DL_POLY Mailing List <[log in to unmask]>

Date:

Tue, 13 Aug 2019 21:26:50 +0100

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (98 lines)

yes. you can do one atom. I did not put the external field but look at
see the files below

you need to run
DLPOLY.Z na.control

cat na.control

DL_POLY:
temperature       4.2
pressure          0.001

ensemble nvt hoover 0.5 0.1

timestep          0.03 ps

steps             1000
equilibration     100
collect
cutoff          5.00 angstrom
rpad 0.0
ewald precision 1e-5
#no elec
#traj 100 100 2
io field na.field
io config na.config
no vom
print every      10 steps
stats every      10 steps
stack           100 deep

job time  2000 seconds
close time  10 seconds

finish
============
cat na.field

DL_POLY Na
units kj
molecules 1
Na
nummols        1
atoms 1
Na  22.9898         1.0    1  0
finish
vdw 0
close

=====================
cat na.config

Na
        0         3         1
      10.5180000000        0.0000000000        0.0000000000
       0.0000000000       10.5180000000        0.0000000000
       0.0000000000        0.0000000000       10.5180000000
Na               1
   0.0000000        0.000000        0.0
=======================================

Without Questions there are no Answers!
______________________________________________________________________
Dr. Alin Marin ELENA
http://alin.elena.space/
______________________________________________________________________

On Tue, 13 Aug 2019 at 21:18, Meilani Wibowo <[log in to unmask]> wrote:
>
> Dear all,
>
> is it possible to run a MD simulation of a single atom or charged particle using DL_POLY? If it is possible, how should I describe it in the FIELD file? The one below does not work...
>
> Na+ motion
> units internal
> molecular types 1
> Na+
> nummols 1
> atoms 1
> Na+          22.9898         1.0    1
> finish
> close
>
> My idea is to test the effects of magnetic field on the motion of charged particle.
>
> Thanks,
> Meilani.
>
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