Howdy,
It looks to me like all of the errors are less than 1%. The errors are
reported as percentages, not fractions. So a reported value of e.g.
0.49 is less than 1%.
Cheers,
Paul
On 08/08/2019, Subscribe_FSL_Jie Zhang <[log in to unmask]> wrote:
> Hi everyone,
>
> I installed FSL 6.0 on macOS X 10.14.6 yesterday, and the tests with 'echo
> $FSLDIR' and 'flirt -version' are ok. But after I run FEEDS (FSL Evaluation
> and Example Data Suite for FSL 6.0), the error percentage of several tools
> in the output is quite high, since a reported error of 1% is considered a
> failure. I wonder if I can go on my own analysis (including eddy, BET, FDT,
> bedpostx) with the current installed FSL with such high error percentage. If
> NOT, how can I lower the error percentage?
>
> Here is the complete text output from RUN:
>
> JallysondeMBP:feeds Jallyson$ /usr/bin/time ./RUN all
>
> FSL Evaluation and Example Data Suite v6.0.1
>
> start time = 2019-08-08 Thur 10:36:53 CST
> hostname = JallysondeMBP.lan
> os = Darwin JallysondeMBP.lan 18.7.0 Darwin Kernel Version 18.7.0: Thu Jun
> 20 18:42:21 PDT 2019; root:xnu-4903.270.47~4/RELEASE_X86_64 x86_64
>
>
> /bin/rm -rf /Users/Jallyson/Downloads/feeds/results ; mkdir
> /Users/Jallyson/Downloads/feeds/results
>
>
> Starting PRELUDE & FUGUE at 2019-08-08 Thur 10:36:53 CST
> % error = 0.0
> % error = 0.0
>
> Starting SUSAN at 2019-08-08 Thur 10:36:54 CST
> % error = 0.03
>
> Starting SIENAX (including testing BET and FLIRT and FAST) at 2019-08-08
> Thur 10:37:43 CST
> checking error on BET:
> % error = 0.0
> checking error on FLIRT:
> % error = 0.08
> checking error on FAST:
> checking error on single-image binary segmentation:
> % error = 0.37
> checking error on partial volume images:
> % error = 0.29
> % error = 0.41
> % error = 0.29
> checking error on SIENAX volume outputs:
> % error = 0.03
> % error = 0.11
> % error = 0.3
> % error = 0.13
> % error = 0.16
>
> Starting BET2 at 2019-08-08 Thur 10:41:38 CST
> checking error on T1 brain extraction:
> % error = 0.0
> checking error on skull and scalp surfaces:
> % error = 0.12
> % error = 0.26
> % error = 0.31
>
> Starting FEAT at 2019-08-08 Thur 10:44:24 CST
> checking error on filtered functional data:
> % error = 0.38
> checking error on raw Z stat images:
> % error = 0.46
> % error = 0.29
> % error = 0.4
> checking error on thresholded Z stat images:
> % error = 0.44
> % error = 0.38
> % error = 0.46
> checking error on registration images:
> % error = 0.0
> % error = 0.02
> checking error on position of largest cluster of Talairached zfstat1:
> % error = 0.0
> % error = 0.02
> % error = 0.01
> % error = 0.05
> % error = 0.16
> % error = 0.02
>
> Starting MELODIC at 2019-08-08 Thur 10:47:13 CST
> % error = 0.73
>
> Starting FIRST at 2019-08-08 Thur 10:48:41 CST
> % error = 0.68
>
> Starting FDT (bedpost) at 2019-08-08 Thur 10:50:57 CST
> checking error on bedpost output:
> % error = 0.63
> % error = 0.01
> % error = 0.34
> % error = 0.21
> % error = 0.07
> % error = 0.33
> % error = 0.2
>
> Starting FNIRT at 2019-08-08 Thur 10:56:19 CST
> % error = 0.03
>
> end time = 2019-08-08 Thur 10:56:48 CST
>
>
> All tests passed
> 1194.72 real 947.98 user 47.40 sys
>
>
> Looking forward to your beneficial reply!
>
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