Dear FSL experts:
I tried the skull segmentation on a sample T1 weighted image 113-01-MPRAGE.nii.gz.
I used the following steps to generate inskull_mask and outskull_mask separately.
step 1: use bet2 to generate inner & outer skull, outer scalp masks
bet 113-01-MPRAGE.nii.gz test -m -R -A
step 2: get the difference between inskull and outskull, stored in 'test_inskull_mask.nii.gz' and 'test_outskull_mask.nii.gz' respectively
d =outskull - inskull
The difference image d is saved as 'difference.nii.gz'
step 3: overlay difference d on the original t1 weighted image 113-01-MPRAGE.nii.gz. Results seem not very good.
Can someone provide suggestions to improve the results?
As I am new to this forum, can someone points out where I can upload these generated files, as previous post was rejected because "exceeds the
maximum message size of 200k".
Regards
Xuesong
Many Thanks.
########################################################################
To unsubscribe from the FSL list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1
|