Hi everyone,
I'm facing an issue in performing cortical thickness analysis using CAT12. In the first step when I tried running the segmentation using the default pipeline, it is throwing off an error which is shown below. Could anyone please suggest me some solution? Any help on this would be very much appreciated.
thanks,
Print 'Graphics' figure to:
/storage/shared/research/cinn/2009/emprew/Varun_ExploreDTI/Cortical_thickness_analysis_CAT_91subjs/report/catreport_Con_P001_T1.pdf
Failed 'CAT12: Segmentation'
Error using cat_check_system_output (line 27)
ln: failed to create symbolic link ''/storage/shared/research/cinn/2009/emprew/Varun_ExploreDTI/Cortical_thickness_analysis_CAT_91subjs/err/cat_check_system_output.line27.CAT.system_error/Con_P001_T1.nii'': File exists
In file "/storage/shared/research/cinn/2009/emprew/Varun_ExploreDTI/Softwares/spm12/toolbox/cat12/cat_check_system_output.m" (v1022), function "cat_check_system_output" at line 27.
In file "/storage/shared/research/cinn/2009/emprew/Varun_ExploreDTI/Softwares/spm12/toolbox/cat12/cat_run_newcatch.m" (???), function "cat_run_newcatch" at line 97.
In file "/storage/shared/research/cinn/2009/emprew/Varun_ExploreDTI/Softwares/spm12/toolbox/cat12/cat_run.m" (v1439), function "run_job" at line 720.
In file "/storage/shared/research/cinn/2009/emprew/Varun_ExploreDTI/Softwares/spm12/toolbox/cat12/cat_run.m" (v1439), function "cat_run" at line 434.
The following modules did not run:
Failed: CAT12: Segmentation
best regards,
Varun
PhD scholar in Neurosciences
School of Psychology and Clinical Language Sciences
University of Reading, Whiteknights campus,
United Kingdom
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