Hi Paul,
I'm running:
/usr/local/fix/fix -t TestFIXtrainer FEATFOLDERS
With "FEATFOLDERS" being paths to 6 feat folders in which I have a "filtered_func_data.ica"-folder and an "mc"-folder as wells as "hand_labels_noise.txt" and the usual output of a 1st level feat. I've deleted the generated fix-folder in each feat folder between each test run as well as the "TestFIXtrainer" folder and the "errorLog.txt". Are there other files that could interfere?
One possible problem is that I'm analyzing data from an ISSS-sequence (DOI: 10.1016/j.neuroimage.2005.08.025) and to get the timings right I've inserted the "mean_func" in the silent gaps after motion correction. I tried adjusting for this by putting zeros on the rows representing the silent gaps in "mc/prefiltered_func_data_mcf.par". I realize this might not be the best but I thought it might be a stepping stone in debugging.
Cheers,
Mikael
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