Hi,
I've been running MELODIC but I was getting these errors for some reason, and I'm not sure how to correct for it. It seemed to be running fine until the very last step of outputting group ICA .. any insight on how I could fix this error?
first error message:
/Users/sondosayyash/abin/fsl/bin/fsl_sub -T 180 -l logs -N feat4_gica -j 1319,2452,3579,4703,5857,6982,8129,9253,10377,11506,12632,13772,14896,16026,17155,18282,19410,20537,21664,22791,23923,25048,26181,27325,28472,29598,30725,31849,32973,34098,35256,36378,37507,38630,39762,40889,42012,43135,44259,45383,46506,47630,48755,49879,51003,52129,53254,54380,55504,56626,57752,58878,60007,62595,63723,65062 /Users/sondosayyash/abin/fsl/bin/feat /Users/sondosayyash/Downloads/MAVAN_STUDY/MELODIC.gica/design.fsf -D /Users/sondosayyash/Downloads/MAVAN_STUDY/MELODIC.gica -gica
child killed: SIGABRT
while executing
"if { [ catch {
for { set argindex 1 } { $argindex < $argc } { incr argindex 1 } {
switch -- [ lindex $argv $argindex ] {
-I {
incr arginde..."
(file "/Users/sondosayyash/abin/fsl/bin/feat" line 312)
FATAL ERROR ENCOUNTERED:
COMMAND:
/Users/sondosayyash/abin/fsl/bin/fsl_sub -T 180 -l logs -N feat4_gica -j 1319,2452,3579,4703,5857,6982,8129,9253,10377,11506,12632,13772,14896,16026,17155,18282,19410,20537,21664,22791,23923,25048,26181,27325,28472,29598,30725,31849,32973,34098,35256,36378,37507,38630,39762,40889,42012,43135,44259,45383,46506,47630,48755,49879,51003,52129,53254,54380,55504,56626,57752,58878,60007,62595,63723,65062 /Users/sondosayyash/abin/fsl/bin/feat /Users/sondosayyash/Downloads/MAVAN_STUDY/MELODIC.gica/design.fsf -D /Users/sondosayyash/Downloads/MAVAN_STUDY/MELODIC.gica -gica
ERROR MESSAGE:
child process exited abnormally
END OF ERROR MESSAGE
child killed: SIGABRT
while executing
"if { [ catch {
for { set argindex 1 } { $argindex < $argc } { incr argindex 1 } {
switch -- [ lindex $argv $argindex ] {
-I {
incr arginde..."
(file "/Users/sondosayyash/abin/fsl/bin/feat" line 312)
Error encountered while running in main feat script, halting.
child killed: SIGABRT
*************************
second error message:
Melodic Version 3.15
Melodic results will be in groupmelodic.ica
Create mask ... done
Randomising input file order
Reading data file /Volumes/Sondos_Drive/MAVAN_DATA/NONMAVAN_subj/exam_2173/PreprocessAFNI/exam_2173_results/final_epi_vr_base_MELODIC.ica/reg_standard/filtered_func_data ... done
Estimating data smoothness ... done
Removing mean image ... done
Normalising by voxel-wise variance ...
error: Mat::operator(): index out of bounds
libc++abi.dylib: terminating with uncaught exception of type std::logic_error: Mat::operator(): index out of bounds
FATAL ERROR ENCOUNTERED:
COMMAND:
/Users/sondosayyash/abin/fsl/bin/melodic -i .filelist -o groupmelodic.ica -v --nobet --bgthreshold=10 --tr=3.000000 --report --guireport=../../report.html --bgimage=bg_image -d 25 --mmthresh=0 --Ostats --sep_vn
ERROR MESSAGE:
child killed: SIGABRT
END OF ERROR MESSAGE
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