Dear Abir,
we no longer ship an executable called “eddy". Instead we ship one called “eddy_cuda", for use when you have an Nvidia GPU available on your system and one called “eddy_openmp" for when you have not. You can either use one of those names instead of “eddy”, or you can create an alias.
Jesper
> On 17 Jul 2019, at 13:33, Abir Troudi <[log in to unmask]> wrote:
>
> Dear FSL experts;
>
> I'm using the FSL 6.0.1 in runing eddy after applying topup, I run this command <
> eddy --imain=MOUSA --mask=hifi_nodif_brain_mask --index=MOUSA.txt --acqp=acqparams.txt --bvecs=MOUSA_bvecs --bvals=MOUSA_bvals --fwhm=0 --topup=topup_AP_PA_b0 --flm=quadratic --out=eddy_unwarped_images >
>
> but i got this error <
> No command 'eddy' found, did you mean:
> Command 'teddy' from package 'xteddy' (universe)
> eddy: command not found >
> he could not recognize eddy's command, I do not know if there are any exceptions for the FSL 6.0.1 version
>
> Can you help me please,
> Your help is very much appreciated,
>
> Best Regards
>
> Abir
>
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