Dear FSL users
does anybody know a good way to rotate bvecs after correcting for susceptibility-induced distortions in DWI data based on a T1 image?
I have used this script https://github.com/kathrynalpert/app-dwi2t1-nonlinear to correct these distortions. However, rotating does not work (based on a FSL-format affine transform matrix).
I have tried to find an answer in the mailing list, however, was not succesful. Any help would be greatly appreciated. Thank you very much
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