Hi!
I'm trying to create an ROI from an atlas file which has the same resolution as the standard brain, but not the same (x,y,z) size. They both overlay perfectly in FSLeyes. I have tried selecting the region from the atlas in FSLeyes, and pasting it into a new mask file the same size as the standard brain (not the atlas image), but this doesn't work.
I also cannot extract the mean timeseries from the ROI unless the mask size is the same size as the functional data (which is in the template space).
Does anyone have any idea how to do this?
Thanks!
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