Hi Amelia,
Is this a first-level or group-level analysis?
My only thought is that your mask (which is defined in MNI152 space)
may not be in the same space as your data (which may be in subject
functional space)
Cheers,
Paul
On 16/07/2019, Amelia Couture <[log in to unmask]> wrote:
> Hello,
>
> It's been a few days and I still haven't been able to figure this out. Does
> anyone have any ideas?
>
> I've been working on analyses using a ROI mask, and have been running into
> some difficulties. When I add in my mask file to the pre-threshold masking
> field in the GUI, I get the following error:
>
> /usr/local/fsl/bin/fsl_sub -T 119 -l logs -N feat4_post -j 15012
> /usr/local/fsl/bin/feat *file path to design.fsf* -D *File path to
> Subject001_Run1.feat* -poststats 0
> child killed: SIGABRT
> while executing
> "if { [ catch {
>
> for { set argindex 1 } { $argindex < $argc } { incr argindex 1 } {
> switch -- [ lindex $argv $argindex ] {
>
> -I {
> incr arginde..."
> (file "/usr/local/fsl/bin/feat" line 312)
>
> FATAL ERROR ENCOUNTERED:
> COMMAND:
> /usr/local/fsl/bin/fsl_sub -T 119 -l logs -N feat4_post -j 15012
> /usr/local/fsl/bin/feat *File path to design.fsf* -D *File path to
> Subject001_Run1+.feat* -poststats 0
> ERROR MESSAGE:
> child process exited abnormally
> END OF ERROR MESSAGE
>
> Everything works correctly when I run the same analysis without the mask.
> I've attached the file that I'm uploading for the mask in case that's
> helpful to see.
>
> Thanks!
> Amelia
> --
> Amelia Couture Bue
> Ph.D Candidate
> Department of Communication Studies
> University of Michigan
> (she/her/hers)
>
> ########################################################################
>
> To unsubscribe from the FSL list, click the following link:
> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1
>
########################################################################
To unsubscribe from the FSL list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1
|