Hello,
I am having some difficulty creating a training set for FSL Fix. I have gone through the README, but cannot seem to find a way to get an .RDATA file.
Specifically, after running:
fix -t <training> <melodic.ica> ...
I am given the following errors:
Image Exception : #22 :: ERROR: Could not open image melodic.ica/reg/highres
terminate called after throwing an instance of 'RBD_Common::BaseException'
/apps/fix/fix_0b_apply_fast: line 21: 267955 Aborted (core dumped)
The above error occurs for both fast and flirt processes within FSL FIX.
Furthermore, I am given an output directory called "training." Within this "training" directory, I have the samplename.txt files that show all of the hand labeled components. The hidden files reveal that at the end of each .Rlog for each sample, I receive the following error:
Error in file(fie, "rt") : cannot open the connection
Calls: read.csv -> read.table -> file
In addition: Warning message:
In file(file, "rt") :
cannot open file '/data/datafile/training/NA' : No such file or directory
Execution halted.
What am I missing here? I have prepared all of the hand_labels_noise.txt files for each <melodic.ica>. Is there any way to trouble shoot this to obtain a training data set?
Thank you,
Yujie
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